Gene detail

Detailed information of ENSOFVP00000002574.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_027038027.1, myb-related protein B-like isoform X3 [Pocillopora damicornis]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P06876	Transcriptional activator Myb OS=Mus musculus OX=10090 GN=Myb PE=1 SV=2
P46200	Transcriptional activator Myb OS=Bos taurus OX=9913 GN=MYB PE=2 SV=1
P10242	Transcriptional activator Myb OS=Homo sapiens OX=9606 GN=MYB PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001352 (this species only)
Transcription factor family	MYB · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13921 all species →	Myb_DNA-bind_6	Myb-like DNA-binding domain	Domain	Interproscan
PF00249 all species →	Myb_DNA-binding	Myb-like DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050560 all species →	Family	MYB Transcription Factors	Interproscan
IPR001005 all species →	Domain	SANT/Myb domain	Interproscan
IPR017930 all species →	Domain	Myb domain	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45614 all species →	MYB PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09422	MYBP; transcription factor MYB, plant	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.