Genomic Location: :...
NR annotation: CAH3032066.1, unnamed protein product [Pocillopora meandrina]
| CDS | ||||
| ENSOFVT00000003152 | ||||
| Transcript |
| ENSOFVT00000003152 |
| Protein |
| ENSOFVP00000002844.1 |
| Uniprot term | Description | |||
|---|---|---|---|---|
| Q1LVC2 | Protein Jumonji OS=Danio rerio OX=7955 GN=jarid2b PE=3 SV=2 | |||
| Q5F363 | Protein Jumonji OS=Gallus gallus OX=9031 GN=JARID2 PE=2 SV=1 | |||
| Q92833 | Protein Jumonji OS=Homo sapiens OX=9606 GN=JARID2 PE=1 SV=2 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | ARID |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01388 | ARID | ARID/BRIGHT DNA binding domain | Domain | Interproscan |
| PF02928 | zf-C5HC2 | C5HC2 zinc finger | Domain | Interproscan |
| PF02373 | JmjC | JmjC domain, hydroxylase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001606 | Domain | ARID DNA-binding domain | Interproscan |
| IPR003347 | Domain | JmjC domain | Interproscan |
| IPR004198 | Domain | Zinc finger, C5HC2-type | Interproscan |
| IPR036431 | Homologous_superfamily | ARID DNA-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10694 | LYSINE-SPECIFIC DEMETHYLASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0000785 | Cellular Component | chromatin | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006338 | Biological Process | chromatin remodeling | Interproscan |
| GO:0010468 | Biological Process | regulation of gene expression | Interproscan |