Gene detail

Detailed information of ENSOFVP00000003110.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020609599.1, uncharacterized protein LOC110048154 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y2R5	Small ribosomal subunit protein uS17m OS=Homo sapiens OX=9606 GN=MRPS17 PE=1 SV=1
P82916	Small ribosomal subunit protein uS17m OS=Bos taurus OX=9913 GN=MRPS17 PE=1 SV=3
B6EPT4	Small ribosomal subunit protein uS17 OS=Aliivibrio salmonicida (strain LFI1238) OX=316275 GN=rpsQ PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009569 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00366 all species →	Ribosomal_S17	Ribosomal protein S17	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR039193 all species →	Family	Small ribosomal subunit protein uS17m, metazoa	Interproscan
IPR000266 all species →	Family	Small ribosomal subunit protein uS17	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24088 all species →	28S RIBOSOMAL PROTEIN S17, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005763 all species →	Cellular Component	mitochondrial small ribosomal subunit	Interproscan
GO:0032543 all species →	Biological Process	mitochondrial translation	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02961	RP-S17, MRPS17, rpsQ; small subunit ribosomal protein S17	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.