Gene detail

Detailed information of ENSOFVP00000003136.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020611148.1, diphosphomevalonate decarboxylase-like isoform X1 [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000003453

TTGCTCTTAGCGGAACATCAGAACAGTTTGCCTGAGTTGCATAATAATTTAGTAGTTATGTTACGTCTGTATGGTATATGCTTGGGgcaaatatcttttttcattgaCCTTTTGTCAGATCAACATGCATACAAGTCCAATACAGAACAGTTTGGTTTTAAGGTGGAAATGTATGTTTTTTAGCGAATTTCCATATCGTGATCTTCTTTTAGCTCCATTCCATCACAACTGTGGCAGACAGTGAGAATTTTTCTGAGGATTGTCTGTGGCTTAATGGAAGGAAGCATAATGTTGCTGAAATGCCCAGGATTCAGAAGTGTTTATCCAGAATTAGGAAACTGTCTCAGGATGAGAATTTTAAAAACAGGAAGGGGCCAGAGCTTAGAGGGAGGCATGTTCATATCTGTTCAGAGAATAACTTTCCTACAGCTGCAGGCCTGGCATCATCTGCTGCAGGGTATTCTTGCTTAGtGTTTGCCCTGTCGAGGTTATTTCAAATTGATGGTGATCTGTCAACTATAGCaagGCAGGGTTCAGGAAGTGCTTGTCGCAGTATGTATGGAGGATTTGTGGAGTGGGAGAAAGGAGAAAAGGATGATGGATCTGACAGCATCGCTAAGCAGATTGCTAAAGAAGACCATTGGTTAGGATTGAGAGTTCTGATTCTAGTGGTGAATGAACACAAGAAGGGCACAAGTAGCACTGAGGGCATGAGACGAAGCGTTGAAACCAGCGACTTGCTAAAGTTCAGGTCAGAACTGTGCGTCCCCAAAAGAATGGATGTAATGAAAAAAGCGGTGTCAGAAAGAGATTTCAAGACATTTGCAGAAACTACTATGAAGGTTGCCTACACGTTCGATGCAGGACCCAATGCGTTTTTGTTTCTGATGGAAAGCGATATAGCAGAAGTACTGGCTCTGATCAGACATTTCTTTCCCCCGGAAACAGACGCCGGATTCGTTAAAGGAATTGAAATCCGTCCTCAAGCCACTTTATCAAAGAGTCTTTTGGAATCAATAACTATTGAACCAACCCGGGGAGCTGTCAAGTATATTATCTCAACAAAGGCTGGGGATGGACCAAGTGAACTAGGACAGGAATATAGTCTTTTAGATGAAAATGGACTTCCTAAATCATGCGAAACCATCATTCCACAGTCGAACCTTCCCTAACCCAAACCTCAAGTGCAAAGACGCCTCTTCGTATGCGGACAAACAATTGTCCCAGCTAGCTACAAACAACACATTTGTAACTTCCCATGAACGGAAACCCTTCAACTGGACACTTTGTTCAGGCCTCAATGGTGTCCACGTTTTGGAGGTTCGACTTTACTACAATATGTGAAATGATGACTGCTACACAGTTACGGCAGTTGATAGACAGGTTAGCGTTTTTTCAACTGAAGGCTGACTCACTGCCGAAGCTAGATTCACTGAATTCCACCAGCTCAGTGCAGTTCGTTACCAATCACTGGCGCACATGATGATAACCATTGGTGCTAATGGTTAACTTGTGCGTAGTTGAAAGTTGAAGTCGAGCTCTCCAGAATTTGGTTCAAAACTGACAGCATATCTAATATCGGCAACATTGTCCTTTACAAGGGTTTCATCTTGAATCCGAGTCGGTGACTGCATGAAATATACACCCTGCTTTGTGTGGCGAACCCAGTTTAATTTCGATGTCCCTTCTGCGAGCTCTGGATTCTGTAAAAGAATGAAAGAAATATAAGAATGGATTAAACTGACACAGAGAGGCAGTTTTCTACCAACAAATTTTTATATCGCCTCACCTGCTGCAGTCCCGTGGTAATGGTTAGTTTTTCTGTTAAATGGAAATCCATCCATAGTGCAACTCCATGGAAAGTACCTGatctgagaaaagaaatcaattcttTGAATAAAATAACgcgaaatttttaaaaaatcgacGAGAAATGAAAACCTAACAagtaaaagaaaatgaaataaaactgtATTCACAATAAAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q62967	Diphosphomevalonate decarboxylase OS=Rattus norvegicus OX=10116 GN=Mvd PE=1 SV=2
P53602	Diphosphomevalonate decarboxylase OS=Homo sapiens OX=9606 GN=MVD PE=1 SV=1
Q5U403	Diphosphomevalonate decarboxylase OS=Danio rerio OX=7955 GN=mvd PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004217 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18376 all species →	MDD_C	Mevalonate 5-diphosphate decarboxylase C-terminal domain	Domain	Interproscan
PF00288 all species →	GHMP_kinases_N	GHMP kinases N terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014721 all species →	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR041431 all species →	Domain	Mvd1, C-terminal	Interproscan
IPR036554 all species →	Homologous_superfamily	GHMP kinase, C-terminal domain superfamily	Interproscan
IPR006204 all species →	Domain	GHMP kinase N-terminal domain	Interproscan
IPR029765 all species →	Family	Diphosphomevalonate decarboxylase	Interproscan
IPR020568 all species →	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR005935 all species →	Family	Diphosphomevalonate/phosphomevalonate decarboxylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10977 all species →	DIPHOSPHOMEVALONATE DECARBOXYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004163 all species →	Molecular Function	diphosphomevalonate decarboxylase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0019287 all species →	Biological Process	isopentenyl diphosphate biosynthetic process, mevalonate pathway	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0008299 all species →	Biological Process	isoprenoid biosynthetic process	Interproscan
GO:0016831 all species →	Molecular Function	carboxy-lyase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000003136.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.