Gene detail

Detailed information of ENSOFVP00000003621.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: RMX47609.1, hypothetical protein pdam_00015118 [Pocillopora damicornis]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000003945

aataaaTCCTCGACAGAAGTTTTCTGAGAATTCTCTGCGACAAAATGGCTCACACTGTTATATCCATGAAGTTACCTCCAAACATAGATCCAACAAAATCACGAATTGCCTATGGAGATCGTGCACTGCCTAAACTAAACCGTGAATTAAACAGTCCAGATCTTTTGACACGCCAAAGAGCACTGATGTCACTTTGCGATGTGATGCACAATCCTGAACACATATCTGAAGGACTCAGAGTTGGTATTGGTGCAAGTTTAAAGTCTCTGCTAAAAGACTCTGACGCTACTGTGAGACACAAAGCCACCGAAGTGCTTGGTATTGTTGCAGGTCACGCAGTTGGGCGAGATGCATTTGTTGATCACAAAATGATTGTACCATTATCAGAACTGTTTGATGACAATGTTTATCAAGCAAGAAGGAATGCCCACCGAGCAATAGAAATGTGTGTACACATGAGTCCAGGCACTGAAGGAGTGGTTGATGCTAAACTTGTCCCTGTATTGGTCAGAAAACTTCTTAAAGAAGAGGATGAAATCAAGGAACTCATCTTAGACACCCTTCATTATTGTATGACGATAGAAACCCAGTCAGCATTAGAAAGTGGAGCTATGGAAAGCTTCactaaattactttcacacaaAACAGCAACAATCAGAGGAAAAGCTGCAAGGGATGTCATGGATTTGAGtttTCCACTGGATGGTAAAGACAAAGCGGTTGACGTAGGTGCAATTCCTGAACTGGTTTCCCTTCTTGAGGATGATAATACTGATGTCAAGGCACAGGCTGCTGGAGCTATTATGACGATCACAATAACAACTAAAGGCAAGAATTCCGCAATTGAGGCAAATGCAATTCCAAACCTTGTGAAGTTGCTGGATGATCCAGAGAGTGAAGTTAGACTAAATGCACTCAAAGCAATTACAACGCTTGCAGAAGCTCCATTAGGCAGAACAACGTTACTGGCTTCAGTAAATGAGGTGTCAAAACTCATCCATGATCACAACAGTCCAGCTGTGAGGAAGGCGGCACAGATTGCTGTTCAAGTTATTACTTGGAAACCATGAACAAAATCTGCCacgtgatatttttattttggaataaaataaaaaactgcATATTATATAATAATGATATCTTGTACAGTTTTAAAATCTAATTGACTGTACCTGTAAATTAAGGTACTTGTCACTTATCTACAATGTAACTCTGGTAAATGTAGATGCAAGACCTCCTGTCAAGAGGTGTACGAATTAGTTGTATCACAATACATGTACAGAATCAAGTTTATTAGTGAGAAGTACTTGAGATTTTACATAACAGAACTTTAGTTCTGCAGCTCATTCATAATACAGTATATACATGCATTTACTGGTAAGAGTTGTTACATATGGTAGACATAAATTATCAGGGCTATAGCActcttttttaaaattcaatgaACCTATTAAAGAGAGTTTGCTGGGAACATGTACAGTATGTGTGATAAAGTGTAACATTCTGTATTGGTTAAAAACAGGAATTCATAAGAATTCACTTTTCAAGGTTCCTCTAACTATGTATATATAATGATTGATACAGATCTGTGAGTaataacttacatgtacattgaagATTACTACTCAAAATAAAAGATTGAAATAAAATCACGATTCATTTTTAACTGACAGCTGCCTTCATTTGACTTTGTTGCGATTACTTAAATGGttaatgttaaaatttaattttgtagATTCCATTGTCAATTTTGTGAGGCATGGCCAATATCCTTAAAGGTTGTGACACCAACTGTTACAGTCCAGTGCAGGAATATATCATCACTGAAGAGTAACAACATACATGCACTTGTCACATGGTAGACAGGTCTGTCTTCAAGATTTGATTAATCTGTAGCCTTACAATCACGTTATCTTCACAActgtaacaaacttgttactttatggGTGAATTGTATCGGCAACAGGTCAGTTCACCCGTAAC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9D3W1	Radial spoke head 14 homolog OS=Mus musculus OX=10090 GN=Rsph14 PE=1 SV=1
Q9UHP6	Radial spoke head 14 homolog OS=Homo sapiens OX=9606 GN=RSPH14 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007757 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13646 all species →	HEAT_2	HEAT repeats	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000225 all species →	Repeat	Armadillo	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR042856 all species →	Family	Radial spoke protein 14	Interproscan
IPR021133 all species →	Repeat	HEAT, type 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15599 all species →	RTDR1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25459	RSPH14, RTDR1; radial spoke head protein 14	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.