Gene detail

Detailed information of ENSOFVP00000005563.1 in Cyphastrea salae

Genomic Location: :...
NR annotation: XP_020602438.1, neural cell adhesion molecule 1-like isoform X5 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSOFVT00000005964

CGAGCCCCAAGATGGTCTGCGTGGGTGGCTAACCGCAGAATGAAAGCTGGCCACTTAAGACAGGTTTCCATGGTAACACTGCCAATTCCAACACTCAAAGCCCAGCAAGGTGGAGACCTTCCTTTTCAATGTGAGGTAACAGGTGAAAACTTTGTGGCCTGGGTAACACCAGCCAAACCAGCACGACCAGGAAGACCTGCTATACCAAGTGTTAGAATCCCAGCTTCTCAAACAACAACTGTAAACAGGAGAAGAATCTCAGTGTCTGGAGACACTTATGAAATTGCGATAGAGAATGTGACAGTTGATGACGGTGGCGAATACATCTGTGAAGGATCACTTAACAACAGTGCTGTCTTCACTCTTCAAGTTGAATTTGAAACAGGACACGTTATCGCGAAACAAGAATTGCATCTTGGTAGAAATGGAACAATAAAACTGGATGTATCTGCATATCCACCACTAACTTATAACTGGAGTAAAGACGGACAACAACTGAACTTCCCTGTGGCAGGCAAAACGCTTGATCCGTACACTGGCTCTATTTCCATTGATAATGTCCAAGAAAGTGATCAAGGAAACTACACTTGCACAGTGAAATTTGGTATAGAAGACACTGTTGGGATTGAAGTCACAACGATAAGTAAGGTCTACCAAGGGGACCCAGTCTATCGTAGACTAACACTGGGCAGCAAAGTTACATTTCATTGTGATGTCGAGTCTGGACATCCAAAGCCAGAAGTCGCTTGGTATTTTGGTTGGACAGATACACTGAAAAAAGTTGACCCCATCTATGATGCAAGATTTACATTTCCAACTGATGAAACCTGGTCTATAACTGGAGTTCAGACAATCGACAAAGGCAGATATAGGTGCATAGCTAATAACAAAGCTGGGGAAGATGATCTGAGGTTTGAGATTACACATGTTGATGTCTCACCAACAATTGACCCATTGACAGACATAATAGCAAATGCTGGTGATAAAGTGGACTTGGAGTGCGTTGCTGCAGGAACACCAACTCCAGCTGTGGAATGGCACTACAGTGGAAGTTACTACACTGGACAAAAGAAAGTTGCACAAATATCATTTGTAAGTGTCCACTTGGTAAACACTGGAGAATACGCTTGTCAAGCAACAAATGGTGCCCTTGATGGAAATGGCGATGTTATCGAGGTTGAGAAAACAATGAACCTCTTTGTGAGATCTCCACCCCAAATTAATGAGGATGCATCCCCCACCCCAGTATACTCTTTTGTGGGAAACAGGAAACTGGTTGCTGTCACTTGTATGTTTTACGGATACCCAGTGCCGACAGTGATCATGAGGGATGAAAATGGTACCGAGATTGATAATACAGTTTTTCCCGCCTTCAGAGTCCTGCCGATTCAAAGTTTTGGCGCACCAGCCGTACGCAACGTAGTTCAAGTTAGTGCtaacaaatcaatttttttagaGCCCCCAGGTTCACCCCGCAATGTAACTGCAAACAGCACTTGTAAAGACATCACTCTCATGTGGAAGCGTCCATTGGATAACGGCGGCATGGAAATTACCAATTATACCATAACAGTAATTTCCAGTGGATACCAACTGTACAGAGAAGATGTTGATGGATTTACAGATGAACGTAGCATTGGCTACAGCTTTACCCCAGATACAACATATGAAGTGCGACTCAAGGCACGCACTGAAGCTGGACCTGGGTATGAAGAGACTGTGTTTGTGACGACTGACAAGTATTGTGTAATAGGGAAACCATCCATCACCAACGCCGAAGTTGAAGTCGACACTGAGTTCACTGTAACCTGGTCTGCACCACAAAACCACAGTAACGATAAAGACACTAAATACAGGCTGGAATGGACGCAGAAACCGATCACAAATGACAGCAAAGTGGGCAGAGAAGAAAACATTAATGACACACGATTCAGGATCACTGGTCTGCAGCATAATACAGAGTACGAGATTAAGCTTTATGCTGTCTACAAACAACGAGAAAGTGAACCAGATGTCAGAACAATCAAGACAAAACCCAAAGTTGGTAAGTgcttattataa

Transcript

ENSOFVT00000005964

Protein

Uniprot

Uniprot term	Description
Q3UQ28	Peroxidasin homolog OS=Mus musculus OX=10090 GN=Pxdn PE=1 SV=2
P34082	Fasciclin-2 OS=Drosophila melanogaster OX=7227 GN=Fas2 PE=1 SV=1
Q8WZ42	Titin OS=Homo sapiens OX=9606 GN=TTN PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR051170	Family	Neural and epithelial cell adhesion domain-containing protein	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12231	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0043005	Cellular Component	neuron projection	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06756	NRCAM; neuronal cell adhesion molecule	-	Cell adhesion molecules	ko04514	deepkoala