Gene detail

Detailed information of ENSOFVP00000005627.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: KAJ7392745.1, hypothetical protein OS493_010400 [Desmophyllum pertusum]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000006040

CGGTTGTATTGGGAACAAGCTCGTGAGCAGCCCCTCGCAGTCCGTTCCACCTTGTTTGGTTTATGTGTCAATCACAGTGTGCTGCTTATGCGCCATCAACTCGGTACGCGAGCGTCCAGCGGCCGCTACCCTTTGTCTACACGTGACTTGCTGACGTCATTTGAAATGGTGATCAAATGGGCCTTAAAGCAAGAGGGCTTAGGGGCGTCACAGTTAAAGGCACTTTCTGATGTAATTGCCGAGGGTGTGTATGGTGGAAAAGTAACTGACCCATGGGACCGTCGCTATGTTGCAATCCTGACACATCAGGTGATTAAAGAGACCGCGCTTCAACAGCACTCATCGCTCTCCCTAGGCTCCGTCAGCCTGCCTGTACCACCGGCCAATGTGGACCCAACCGAGTACAGTAAATGGTTCAACGAGAAGACTGGGACAGAGGACGCGGTCATGAGTACAGTTAAGGCCCTGGGTCTAGACATCAGTGTTGAACGGGAATACAACGAGGCTGGTGCCTCGGAATTCATTCATAAACTCAACAAGCTGCACCGGGACATCAATCACACCACTGCACTTGCGCAAGAGCCTTCACCTGGGGCCGTAGTCAACATGCCTCGCTTGCGTGCGTCAATGGACCTGTGCCTTGAACTGCTGCCTACTCTGCTAAAAATAGAAGGAGACGGAGCCATACCTGTCACTCGGCTTCTTCCACGCGTGTTGTCTCAGCTGCGCGCTTTGTCTGTTTATTCGGAGTCCGGTAGCACTGTTGGGTCAGATGAACGCTTGTCAGAGTCTATGGGTTACGTCTTACAGAAGGAATGTCGGTGGTTTAATTGTCTTCTTTACCACATCCGGCACTCGTTACAAATTCTGGAGCAGTGCGTGCTGGGAGGCTCACCTGCAATTCCAACATCCCTCGCGCCCGTTGTTGATGCGCTGCAGGAAGAAGTGGTCCCCGGTGATTGGCTGCATCCCGATTGTCAGCCCTCCCCCCACAGTTTAGCATCCTGGCTCAAAGACTTAAGTCGGCGCCACAAGCAACTCAGTGACTGGGTTCGGCGTGGTATTGTTCCAAATCCAAACTCCGAGCCCTTAGTAGGTCGTGGTCAGCTGACTTCCGTCTGGCTTGGTGGCCTGGCCAACCCCGGAGCGCTGATAACTTCACTGAGGCATGAAAAGGCCGCCATGGTTGGTTGTACGGTGGACGAGGTTGAACTTCGTTGTTCATTGGCGAAGTCCTACTTATCACGTGACGGAAGCATCGATGATTCGGAGCAAGGCCTGGTGGTGAGTGGACTGTTCATTGAGGGTGCGTCGCTGGACCTTGATCAAGAATGCCTAGTGGAACCAACGTCAGCCATATTACAATTACCAGACCTCTTTGTGTCCGCTGTCATACCCGATGAGGAGGAAGCTAAGCCCGAACAGAGGAACGAGGCAGATGATTTGGACGTCTATCGTTGTCCTGTGTTTATGAACAGGgcTCGACAGTGTTGCTCGTTTACATTACCCATCAAATGCTCCAAGACCGCGGAGCACTGGATCCTAGCTGGGGTCGCCATAGTGTTGGATCCAGGAAACTTGTCCAACTCATGGAAACTCGTGCAAAACAGTTTTAAACCACAATAATTTGCAGAATACCTGAGCTTTGAATTATGCTTTAGCACCCGTCTACGAACCATTTCAAGAATGTTTAACGTTCCTTAGAAAGCATTCATAAGTGTTTGATGtgtaattttaatttctcttACTTACACTCCAACACGTTGTAAATAGTTGCTCAAAATTGAGATATTTATTCTTTGTGTGCGTGCTCGGTGCACAAACCGACTGAAAATTGGTGTTGCCTCTGAGAAACCAAGCATTCTATACCTTTCCTGTCATTAAGTTGTGGAACAACCGTCATTTTTCGGAAATCTTCGTTAACAGAGCCTCGATATTTTTCGATTGTTACTGTCCAACTGGACACGTTGTAAGGGGAAAGACGTTTCATATAAGTTCTACCGCGTGGGTACAGTCGATTTTTGAGGTGGGTTTCTGCCTGAAAgagcattttgttttccaaccGGTAGACCAGCATAAAATGCCGTATTTACACAGTCGTGATAGTGTGATCGATTTATTCTTGCCTTTGCTTCTTTGAGATATTCTCAATATGATTCCAACCTGTGTTGGCGAGCCACAAGGGACTTGATCAGAATACTTGTACAGCATGACTTGTTATGAATatattaagttattttttatAAATAAACAAGTTCATTTTCTTCAATTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q69Z23	Dynein axonemal heavy chain 17 OS=Mus musculus OX=10090 GN=Dnah17 PE=1 SV=2
Q9NYC9	Dynein axonemal heavy chain 9 OS=Homo sapiens OX=9606 GN=DNAH9 PE=1 SV=3
P23098	Dynein beta chain, ciliary OS=Tripneustes gratilla OX=7673 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002079 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18199 all species →	Dynein_C	Dynein heavy chain C-terminal domain	Domain	Interproscan
PF18198 all species →	AAA_lid_11	Dynein heavy chain AAA lid domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041228 all species →	Domain	Dynein heavy chain, C-terminal domain	Interproscan
IPR043160 all species →	Homologous_superfamily	Dynein heavy chain, C-terminal domain, barrel region	Interproscan
IPR041658 all species →	Domain	Dynein heavy chain AAA lid domain	Interproscan
IPR026983 all species →	Family	Dynein heavy chain	Interproscan
IPR042219 all species →	Homologous_superfamily	Dynein heavy chain AAA lid domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10676 all species →	DYNEIN HEAVY CHAIN FAMILY PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005930 all species →	Cellular Component	axoneme	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0008569 all species →	Molecular Function	minus-end-directed microtubule motor activity	Interproscan
GO:0030286 all species →	Cellular Component	dynein complex	Interproscan
GO:0045505 all species →	Molecular Function	dynein intermediate chain binding	Interproscan
GO:0051959 all species →	Molecular Function	dynein light intermediate chain binding	Interproscan
GO:0060294 all species →	Biological Process	cilium movement involved in cell motility	Interproscan
GO:0097729 all species →	Cellular Component	9+2 motile cilium	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000005627.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.