Gene detail

Detailed information of ENSOFVP00000006667.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020627230.1, LOW QUALITY PROTEIN: target of EGR1 protein 1-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96GM8	Target of EGR1 protein 1 OS=Homo sapiens OX=9606 GN=TOE1 PE=1 SV=1
Q9D2E2	Target of EGR1 protein 1 OS=Mus musculus OX=10090 GN=Toe1 PE=1 SV=1
Q17QN2	Target of EGR1 protein 1 OS=Bos taurus OX=9913 GN=TOE1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008338 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04857 all species →	CAF1	CAF1 family ribonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006941 all species →	Family	Ribonuclease CAF1	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR051181 all species →	Family	CAF1 family poly(A)-specific ribonucleases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15092 all species →	POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0000175 all species →	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0015030 all species →	Cellular Component	Cajal body	Interproscan
GO:0017069 all species →	Molecular Function	snRNA binding	Interproscan
GO:0034472 all species →	Biological Process	snRNA 3'-end processing	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000006667.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.