Gene detail

Detailed information of ENSOFVP00000007285.1 in Cyphastrea salae

Genomic Location: chr11:958419...968256
NR annotation: XP_020600848.1, uncharacterized protein LOC110040001 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSOFVT00000007947

ATGCACCACGAAGAGGAAATGGAGCTGACGTTCCCACGCTCTGTGTATGGAGAAATTGGAGATAAAGATATTGATTCCTTTCATAGTGAAGGTGAAGTGAGTCAATTAGAGAGAGGACAGATACATGAAAGAATCAAACCAGATTTTAACCTGATCAATGTCGATAACAGAGTTGTTTCATTAGAACTGGATCATTTAGGCTCACCTAATGATCCAGATCTGGTTCAATGTTCGTCATCGACATTGCAAAGTAACCATCAGCAACCTGACACACAGGAAACTCCTTCCTCATTAATTGCAGTTGAGAATTCCAATATGAACAAAGGATCTCATGAAACACCCACAAACAAGGTGCAAGAAATAAACTCAGATCCACAAGGCTCTGAGGATCATATAACCAACGCTGCATTACTTCAAGAACAGGATAAAAATATGAGGGAAATAACCATCCAGGTTTACCCAGGCCATAACCAGGCTATATCGCTGGTAACAAACGGAATCCTTACCACTGATGTCACTACCTTTTCTACGCAAGTCCCTACAATATTAACAGAAGGTGATGCGGAAGACAATGAAACACATTATCAAGTTGTTACAACCAGTTCTGTGCTCAATCAAGCAGATGGGAGTGCTGCATTGGATGTCTTAACTTCATCATCAGACTTTGGCAGGAATGTGATTTTGACCGAGCAGCAGCAAGTTTTGCTAAGTGGTATGCTTGTTCCTGGCGTCACTGGTAATCAAGCAATTCACATAAACATGACACAGGAGGGTGGTGCCTGTATAGACATGAATGAGATTCCACAGGAAGACCAGGAGAATGAAGAGTGTGCAGATGGAAAAGGCCATGCATGTCCTCACCCAGGTTGCAATAAAGTATGTTCAAAAGCATACAAACTGAAGCTGCACATGCTGACACACACAGGAGAAAGACCTTACAAGTGTCCACATGAAGGTTGTGAGTGGGCATTTACTACAGCCTATAAATTAAAGAGACATGCCCGGGGTCATACTGGAGAAAAACCTTACTTGTGTACTCATGAAGGATGCGGCAAATCCTTTACCACTGCTTACAACTTAAAAACACATGTCAGAGCACACTACCGGGAAGACACCCACATGTGCAGGTACGAAGGCTGTGGCAAAACTTTCCCCACCGAACACAAGTTAAAAGTACACGAGAGGAGACATCAGGCTGACCGGAAACTGTACAAATGTGAGATAGAGGGGTGCAACAAAGTCTTCTCTACTCCTGGAACTTTGACATCTCACATTCGGACTCACAGCGGTGAAAAACCTCATGCATGTCCTGTTGATGGATGTGAGAAGCGATTTACCAAAGCATCCAAGCTAAAGCTACATATACGATCTCACACAGGAGAGCGTCCATTTCATTGTGAAACTGAGGGGTGTGGTTGGTCATTCACAAGTGCTTACAAACTAAAGAGACACATGCGGAAGCACACTGGTGAAAGGCCGTTTATGTGCAACCATGAAGGCTGCGGTAAATCCTTCACCAGGTCAAGTCATTTGAAGACTCACAAGCTTGTTCACACAGGAGAAAAACCTTATGTTTGTCCAGTTGAGGGGTGCAACAAGGCATTTACAGCTGGAAGTAGTCTCAATGTTCACATGTGTAAACACACTGGTCAAAAGCCATTCAAATGTGACGTAGATGGCTGTAATAAAACATACACAACTGCTGCAAACTTGAGAGCTCACCAAAAGCGACATGGAAACAAGGCATTAACAGTGGATTTCAATGACTCTTCACATGGTGATATAACAGCTGAGCTCAGTGCAGTTAGCTGTGGAAGCAACACGAGTGAAACAGAACCCGAGGTCATGTACACCGCCATTGGTGCTTTCCATTCCAGTAATTTTCACTTGGACGATGCTGCTCGCCTTTCATCGGTTGGAACCCTGTGCACCCTGGTTACCTCCGCAGGACACCCACTCATCCCACCGCCTGGTGAAATAGTGCTGGAAACGGAAACAAAACAGTCAGATGATGGAGAAATTAAAACCACAGTGTCAGGAATTCAAATACCAATTTCTATTCAACAGGAGCCGTTTGCTACGGAGGGTTtagaaaacaattcaaaattagaTGTCTCTGAATTTGTAGTGAGAAGCACTGGTGATGATCAAGACCCAATTTCTCAACACTCCACCCAGACAAGGACGGAGGTAGTTGGAGGGACTATTTTGGAAGGAAGCAAGCTTACTGGAGGGTTTGATCTTTGTATTACGAGCATGATGAGTCATATAACAAGCGAGACAGGGCAAGAGGGACTTGGATCCGCCACAAAAGCTTTACATCCAGCTGTTGTGTCCTCGGACTCTGGCAAAAGATCAAGAACTCTTGATTTCAGAGATGTTCATCCTGAGGATCAGTTTGCGCCCCCTGCTGTTATTTTTCAGGATGAAATCAAATCTTCAGACACTGAAAACGAAGCTGAAGTGTTGGTGGCTCAAATCCAACAATCACCCGAGGGAATTCCTGTAGTGCAACTCCCGAAGGAATCAATGCAGGTCAGTTTATCCCAGGGATTAATCACAGAGTCGGCAGTCGCTATGGTTCATGTGTCAGAGGTGGAACACATGGAAGTGGACACAAATGACAGTCCCGCTGATACAGCGCCCTCCGAGATTCCCCTGGTGCCCATTCCATCCCTTTCAGATGTACCGAAGGGAAGAGGAAGTCTGGGGAAAGGCGATCTATCTCCATATATGGACACTCACAGTTGTTCAGAACAAGAGGAAGGCAATGGTGACACGTATCCAGAGAGTACAATTAATTTACAGGACCTGCGCTGA

Transcript

ENSOFVT00000007947

ACACATCTCGTTCGTCACATGATGTGGAAACAGCATCCTCTGATGTACTTGAAAATGAGCTCACCATTCCAACAGCTTGTGCAGGCTCAACACATGATAAAAACTTTTTGTGTTGTGAGTCAGGCCAGACTAGTTCAGATCAAGACTGCTTTATTGTGGATGGTAACATAGAGGAACAAATTTCGTCCCATTTCCAACATAACAGTGCCATGCACCACGAAGAGGAAATGGAGCTGACGTTCCCACGCTCTGTGTATGGAGAAATTGGAGATAAAGATATTGATTCCTTTCATAGTGAAGGTGAAGTGAGTCAATTAGAGAGAGGACAGATACATGAAAGAATCAAACCAGATTTTAACCTGATCAATGTCGATAACAGAGTTGTTTCATTAGAACTGGATCATTTAGGCTCACCTAATGATCCAGATCTGGTTCAATGTTCGTCATCGACATTGCAAAGTAACCATCAGCAACCTGACACACAGGAAACTCCTTCCTCATTAATTGCAGTTGAGAATTCCAATATGAACAAAGGATCTCATGAAACACCCACAAACAAGGTGCAAGAAATAAACTCAGATCCACAAGGCTCTGAGGATCATATAACCAACGCTGCATTACTTCAAGAACAGGATAAAAATATGAGGGAAATAACCATCCAGGTTTACCCAGGCCATAACCAGGCTATATCGCTGGTAACAAACGGAATCCTTACCACTGATGTCACTACCTTTTCTACGCAAGTCCCTACAATATTAACAGAAGGTGATGCGGAAGACAATGAAACACATTATCAAGTTGTTACAACCAGTTCTGTGCTCAATCAAGCAGATGGGAGTGCTGCATTGGATGTCTTAACTTCATCATCAGACTTTGGCAGGAATGTGATTTTGACCGAGCAGCAGCAAGTTTTGCTAAGTGGTATGCTTGTTCCTGGCGTCACTGGTAATCAAGCAATTCACATAAACATGACACAGGAGGGTGGTGCCTGTATAGACATGAATGAGATTCCACAGGAAGACCAGGAGAATGAAGAGTGTGCAGATGGAAAAGGCCATGCATGTCCTCACCCAGGTTGCAATAAAGTATGTTCAAAAGCATACAAACTGAAGCTGCACATGCTGACACACACAGGAGAAAGACCTTACAAGTGTCCACATGAAGGTTGTGAGTGGGCATTTACTACAGCCTATAAATTAAAGAGACATGCCCGGGGTCATACTGGAGAAAAACCTTACTTGTGTACTCATGAAGGATGCGGCAAATCCTTTACCACTGCTTACAACTTAAAAACACATGTCAGAGCACACTACCGGGAAGACACCCACATGTGCAGGTACGAAGGCTGTGGCAAAACTTTCCCCACCGAACACAAGTTAAAAGTACACGAGAGGAGACATCAGGCTGACCGGAAACTGTACAAATGTGAGATAGAGGGGTGCAACAAAGTCTTCTCTACTCCTGGAACTTTGACATCTCACATTCGGACTCACAGCGGTGAAAAACCTCATGCATGTCCTGTTGATGGATGTGAGAAGCGATTTACCAAAGCATCCAAGCTAAAGCTACATATACGATCTCACACAGGAGAGCGTCCATTTCATTGTGAAACTGAGGGGTGTGGTTGGTCATTCACAAGTGCTTACAAACTAAAGAGACACATGCGGAAGCACACTGGTGAAAGGCCGTTTATGTGCAACCATGAAGGCTGCGGTAAATCCTTCACCAGGTCAAGTCATTTGAAGACTCACAAGCTTGTTCACACAGGAGAAAAACCTTATGTTTGTCCAGTTGAGGGGTGCAACAAGGCATTTACAGCTGGAAGTAGTCTCAATGTTCACATGTGTAAACACACTGGTCAAAAGCCATTCAAATGTGACGTAGATGGCTGTAATAAAACATACACAACTGCTGCAAACTTGAGAGCTCACCAAAAGCGACATGGAAACAAGGCATTAACAGTGGATTTCAATGACTCTTCACATGGTGATATAACAGCTGAGCTCAGTGCAGTTAGCTGTGGAAGCAACACGAGTGAAACAGAACCCGAGGTCATGTACACCGCCATTGGTGCTTTCCATTCCAGTAATTTTCACTTGGACGATGCTGCTCGCCTTTCATCGGTTGGAACCCTGTGCACCCTGGTTACCTCCGCAGGACACCCACTCATCCCACCGCCTGGTGAAATAGTGCTGGAAACGGAAACAAAACAGTCAGATGATGGAGAAATTAAAACCACAGTGTCAGGAATTCAAATACCAATTTCTATTCAACAGGAGCCGTTTGCTACGGAGGGTTtagaaaacaattcaaaattagaTGTCTCTGAATTTGTAGTGAGAAGCACTGGTGATGATCAAGACCCAATTTCTCAACACTCCACCCAGACAAGGACGGAGGTAGTTGGAGGGACTATTTTGGAAGGAAGCAAGCTTACTGGAGGGTTTGATCTTTGTATTACGAGCATGATGAGTCATATAACAAGCGAGACAGGGCAAGAGGGACTTGGATCCGCCACAAAAGCTTTACATCCAGCTGTTGTGTCCTCGGACTCTGGCAAAAGATCAAGAACTCTTGATTTCAGAGATGTTCATCCTGAGGATCAGTTTGCGCCCCCTGCTGTTATTTTTCAGGATGAAATCAAATCTTCAGACACTGAAAACGAAGCTGAAGTGTTGGTGGCTCAAATCCAACAATCACCCGAGGGAATTCCTGTAGTGCAACTCCCGAAGGAATCAATGCAGGTCAGTTTATCCCAGGGATTAATCACAGAGTCGGCAGTCGCTATGGTTCATGTGTCAGAGGTGGAACACATGGAAGTGGACACAAATGACAGTCCCGCTGATACAGCGCCCTCCGAGATTCCCCTGGTGCCCATTCCATCCCTTTCAGATGTACCGAAGGGAAGAGGAAGTCTGGGGAAAGGCGATCTATCTCCATATATGGACACTCACAGTTGTTCAGAACAAGAGGAAGGCAATGGTGACACGTATCCAGAGAGTACAATTAATTTACAGGACCTGCGCTGATAAGAAAGACAGTTAACAATATTTGTATATTCATATAACTTTTCTAATACTTGCGAAGTTTGATATGAAATTAAAAGTGATTGTttattagaaaaagaaaaaataatttgcacTCCA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007582 (this species only) · gene tree & orthology
Transcription factor family	zf-C2H2 · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096 all species →	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR051061 all species →	Family	Zinc finger transcriptional regulators	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46179 all species →	ZINC FINGER PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20828	ZNF143_76, STAF; zinc finger protein 143/76	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.