Gene detail

Detailed information of ENSOFVP00000007336.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020603038.1, transmembrane and TPR repeat-containing protein 4-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

ENSOFVT00000008003

ATGGCTCGCTTGCAAAATTTCAACAGAAAACTGGGAAGAGAAACCGAAAAATCTTCGAATCAAGCGCGTAATTTTAAACCCTACCTTCTTGTAGGGATCGCAGCAATTGTGTGCTATTTAAACTCCTTGTTTGGCGAGTTTGTTTACGATGACTACGAAGTTATTGAGACGAATGCGGACATAAGacCTACATCTCCAATTTCTAAGATATTTTCAAACGACTTCTGGGGCCTTCCGCTGAAAAGAAATGACTCTCACAAATCGTATCGTCCTATAACTGTTCTAACATTTCGTTGGAACTTTTTTTTCGGAAGTCTTAATCCAATAGGTTATCACGTAGTTAATGTACTTCTACATTCGTTGGTGTCCATGCTATTTCTTCACGTATGCACAAGGATTTTTAATGGCCACGTTCGTTCACAAACCAATTCATTATCTCTTCTATGTGGATTATTTTTCGCAACTCATCCAATTCACACAGAGGCTGTAGCGAATGTTGTTGGACGCGCCGACATTCTTTGTGGATTATTTTATCTCCTGGCTTTGCTGTCGTACTTAAACTGTTTCCCTGAGGGAACGGCAAAGGACAGCAGCAAAAGGCCGGCAAGGTATTCAAAGTTCTGGCTTGTTTCCTCTATCTTCTGGTGTGTATTATCTCTCTTCAGTAAAGAAAACGGTATTACAGTTCTCGGAGTTTGTGTTGTGTACGACTTCGTCTTCGTCTGCAAGTTCAGCGGAGAGCATTTGTTCAGACCATCATTATATTGGCCTACGGTGCATTTCAGACAATGGCCAAAGTGGGCTGTACGGTTGGTCGAAAGAATTTCCATCTTGGTCTTTGTAGCTGTCATTCTTCTCTACTTCAGGATCGTGATAATTTCTGGGGGTTTTGCGAGTTCATTTACCGAGTCTGACAATCCAACTTTATTTCACCGAGATATATGGACGCGTTTCAGAACGTATTCTTATTTGTGCGCATTAAACGCGCGCCTGCTTCTGTGTCCAAATATCCTTTGTTATGATTGGTCCATGGATAGCATATCCCGGATTGAGTCATGGTGGGACATGCGCAATGTAGAAACACTTGCGTTAAGTGTGATCATggtgtgtttgtgtttttacgGTAAGATGTTCATCTCGTCATCACCTGAAGAACCTACAAAGTCTACGCCGAGCTCGTCGAATGCTTTAACTGTAGATTCTAACGAAAATAATGTATACGAGCGGAAGgaattgaaaatgaaagaacGACAACATTGTGAAGGGAGAATGTTAAAGGGTGGCTTTGATTCTCTACACAGAAGACGAGTTGTGTTGTTTTCACTAGCTATGATGATAATACCATTTCTACCAGCTTCCAATCTCCTTCTCCCAGTCGGATTTGTTGTCGCGGAACGAGTTCTTTACATTCCAAGTATGGGCCTCTGCATTCTCGTTCCATTTGggatttcaattttgtttcaagATTCAACGCAGGAGGAATCCTTAAAACAGGAGGTGATCACTCTCTTCTTTGAAACTTCCTCTATAGACTGGTGTTTTGGTCTGAGTATAGCCGGCatgatatttgtttacagttcCTTGTTGCTGTTTGCTTTCAAAACCGTACACCGCAATTCAGAGTGGCAAAACAAGGAGACTTTGGCTAGATCGGGGCTTAAAGTGAATCCCACGAACGCTAAGATTCATGTTACTTTAGGAAATTTTTTGGCAAGTAGGGGGCTCTTATCTTGTGAGGACCATTATCGTGAGGCCTTGCGCCTGAGACCACATTTCGTCGCAGCCTGGGAGAACCTGGGCTTAGTGCTCCTAAATACAAAAAGAGCCCAGGAGGCCGAGAAATGCTATTTAAAAGCCCTTTCAATCAAACCTAATAGTGCGGACGGCCACATAAACCTTGCACACTTGTTACGAGTGACGGAAAGATTCCACGAAGCGGATGTTCAATATGAGAAAGCGCTGTCTCTCAGGCCTAACAATCCACAGCTCAATTATTTTCATGGCGTAGTGCtggaaaagcttggaaaacGAAAGAAAGCAGAGGAAAGGTatataaaaacaacaaagcTAACACCATTAGATCCAGTGCCGTTCTTTACACTTGGAAAGATGCTTGTCGTGCCTGTTTTAAATAGAAAAGTAAAAAATGGAAGCGGAAAAGCAATAAAGAAGGGAGAAGAGTACTTACAAAAAGCAGTGAAATTAAATCCTTCGGACTTGAATGGCCGTCTCCTACTTGTTCAAATTCACCTTCTTAAGGGAGAGCTTGATTCTGCCGAGTCTGAGGTTCGCTATATCCTCGCTCATGATGTTTACAGCACGGACGCTGAGTTTGTTCTTGGCAGGATTCTGGAGCTTAAGGGTTCACTCAAAGAAGCCAGATATTATTTTCATCGGGTGCTCGAGAAAGACTACAGGCACAGCGGTGCAAGAGACGGTTTACAACGATTGGATAAAAAAAGCATGAAAATTTAA

Transcript

ENSOFVT00000008003

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3UV71	Protein O-mannosyl-transferase TMTC1 OS=Mus musculus OX=10090 GN=Tmtc1 PE=2 SV=2
Q5T4D3	Protein O-mannosyl-transferase TMTC4 OS=Homo sapiens OX=9606 GN=TMTC4 PE=1 SV=2
Q8BG19	Protein O-mannosyl-transferase TMTC4 OS=Mus musculus OX=10090 GN=Tmtc4 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000850 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181 all species →	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF08409 all species →	TMTC_DUF1736	Protein O-mannosyl-transferase TMTC, DUF1736	Family	Interproscan
PF07719 all species →	TPR_2	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052346 all species →	Family	Protein O-mannosyl-transferase TMTC	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR013618 all species →	Domain	Protein O-mannosyl-transferase TMTC, DUF1736	Interproscan
IPR013105 all species →	Repeat	Tetratricopeptide repeat 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44227 all species →	-	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000030 all species →	Molecular Function	mannosyltransferase activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0030968 all species →	Biological Process	endoplasmic reticulum unfolded protein response	Interproscan
GO:0035269 all species →	Biological Process	protein O-linked mannosylation	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000007336.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.