Detailed information of ENSOFVP00000007660.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020611228.1, E3 ubiquitin-protein ligase RAD18-like isoform X2 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9NS91E3 ubiquitin-protein ligase RAD18 OS=Homo sapiens OX=9606 GN=RAD18 PE=1 SV=2
Q9QXK2E3 ubiquitin-protein ligase RAD18 OS=Mus musculus OX=10090 GN=Rad18 PE=1 SV=2
P33288Postreplication repair E3 ubiquitin-protein ligase rad18 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=uvs-2 PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004694 (this species only)
Ubiquitin familyUBD|ZnF|UBZ · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13923
all species →		zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039577
all species →		FamilyE3 ubiquitin-protein ligase Rad18Interproscan
IPR006642
all species →		DomainRad18, zinc finger UBZ4-typeInterproscan
IPR003034
all species →		DomainSAP domainInterproscan
IPR017907
all species →		Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR036361
all species →		Homologous_superfamilySAP domain superfamilyInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14134
all species →		E3 UBIQUITIN-PROTEIN LIGASE RAD18Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003697
all species →		Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006301
all species →		Biological Processpostreplication repairInterproscan
GO:0006513
all species →		Biological Processprotein monoubiquitinationInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan
GO:0097505
all species →		Cellular ComponentRad6-Rad18 complexInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOFVP00000007660.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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