Gene detail

Detailed information of ENSOFVP00000007928.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: CAB3986317.1, Transposable element Tcb1 transposase [Paramuricea clavata]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P35072	Transposable element Tcb1 transposase OS=Caenorhabditis briggsae OX=6238 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000182 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13358 all species →	DDE_3	DDE superfamily endonuclease	Domain	Interproscan
PF01498 all species →	HTH_Tnp_Tc3_2	Transposase	Family	Interproscan
PF02796 all species →	HTH_7	Helix-turn-helix domain of resolvase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038717 all species →	Domain	Tc1-like transposase, DDE domain	Interproscan
IPR052338 all species →	Family	Transposase_5	Interproscan
IPR002492 all species →	Domain	Transposase, Tc1-like	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR006120 all species →	Domain	Resolvase, HTH domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23022 all species →	TRANSPOSABLE ELEMENT-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0006313 all species →	Biological Process	DNA transposition	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0000150 all species →	Molecular Function	DNA strand exchange activity	Interproscan
GO:0006310 all species →	Biological Process	DNA recombination	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000007928.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.