Gene detail

Detailed information of ENSOFVP00000008042.1 in Cyphastrea salae

Genomic Location: chr11:7552233...7567205
NR annotation: XP_020619520.1, uncharacterized protein LOC110057270 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSOFVT00000008745

ATGGAGAGACAACACCATCTCTCCGATCAACTGCGAAACTGGGCCTTAGATGAAATGCGATTTAGACCCCAAGGACGACACGTCAATGCGACTCTTCCTACTAAGGAGGACTTTAAgatGTTGTGTCGTGGGGCCATGGTGGATGTTTGGAATTATGTATTGCAGCATCGAcagaaaatttcaacttttagtTTTATAGTGGTCACGGTCGCTTATGAGAGTTGGTcccttacaagaggttccaaatacagTATAATGATTCGACTTGGaaatttttggtattttggaaaacaggTTGCTGCTCAGAGGAGTCCCCTTGACAACATAACCTTCTCTGCTAGACAAAAGCTAATCCAGGAAATGGCAGCCCATCCAGGTGACCAACCAAGCGATGAAGAAAGAGAGAGCATCAAAGAAAAGCACTCAAAGTTAACAAAAGAACTTTTGGAAGTCAGAAGCAAAGTTCATCATcttgaaaaagaaatcaaagctGTGCAGAAGGAAATTCTTGAAGCAGAAGAATCTTACTCTGAAGGTGGGCGACAAATTTCTGATCTTGCCAAAAGAAATACTTTGCTGAGTGCCCATTCCAAACAGTGCAAGCAGTTAGCAGAATTGTACAGAAGCTTGGCTAAACAGATCAATGACAAGATAACAATTTGTAGGGATGTTGCAAGAAAGAAATCCATGGATCCAACATATTACACATCACAAGGTATCATTACTGGAAGCTCACAGGCATTTACAACTATTGAAGGACGATCAACTCCTACTGGGCTGGAGTCAGCTTGTACTAGATCAGTTAGGGAATCTTGTGAGAGAATTGGTTCCTTTTTGCATGAAGTGTGCAAGGCAGAGGAAGAAACTGGAAGaaTTGATGACAGCAGTCAGAGAAGGATTAAAGATCAGCTGTGGACTGGAGtagaaAATATCTTGTCTCAGCACCTGGCAGATGATGTCCTCACCTCATTGTCTCGAATAGCACAGGACTCCGCTGTCAGTCTGCGGGAATTGTCTGCAAGAATTGACCTAAAAAAAGATGCCCAAGAACTCAAGTTTAAATATGAAAACTCTGGTAAACTAACTGACACATCATCCCCACCTTCCTTACTGCAAAGTGTTCACCAGTTAATAGAGGTGAGTCGTAATCTTTTTTATTATCTGGATCAGGAAAATGTCAGGGAATTTCGCATGTATTTTGAGTCAGGAaaatttgaagtaatttatcACAGCTGTTTTAATATCATTGAAGCTGCTCATTTTCAAAGGTTTATTGAGTCAGAAAAAGGTCTCAATGAAGCCTGGAGGGCAAGACAAAGACTGCAAACACTGCAGCAACAATTGGAGGCTAATCTGGTGCAAAGTCATCAAGACTCCCCTGGAAATATTGAACTGGCAAGAGTTTTACTTCATAATGAATTGGAGCTGACAGCATCCAAGGCATCACTGGAATACATGAAAGCAGAAATGGCTGAGCTGACCAACTCCAGGAACGAAAGACAAAGAGCTAAGGAATTGCTGCACATGAAACACAAGAAGATTGAAGATTTTGAGAAACTTGCTcaaaccaaacaatcCCTCATTCAAGCTCTTGTCAAGCAGAATTCCAATGCCAGAGCAAGGGTTGAGAAGCAGAAACACGAGCTCTTACAGTACATACAGCAAAAGATCTGCTCGCACGAGGTTCAGGTGGTTGTCATGGCTAAACAGCTACACAACAACATCGCACAGGAGGTGGATAAGTTTGCTGCACTACCCCTGGATCAATTTCAATACTCCGGTGTACACAGTACAAGAAGAGTTCCAGTCAGCGAGTTATCGATCAATCGTTTAGAACATCTCTCAACAAGTCCAGGAGGCGGTACAATCAGAGCTGTGTTAGACAGTCTGGACTTCCCAGCCTACAAGGCCCCTGAAGACTTGCTGTCGACAACCATGAAGTTGAAAGAGAAAGTTGACGACACAAGATCCCTCGTACGGTCACGTGATGGTGCagttggtgaagtggaaggtgACAGGTCGTGCGAGAGAATGGTCGCGCATTTGAATGGTTTAAGACGGGAGGTCACTGAGCAGGACCGCGCACAACTCGATTACATTATGCCGCTGGTACAGAACGGGCTCAATAAAACCACCAAAGTTTTGTCAGATTGCATTTCTGTCAAGGATATCGTGAGTTCATGGTATGGACGTCTTTTGTTTCTGGTGTCGATAACAATCGATATTTCTCAGTGTTATGTCTTTCTTGAGGACTGGAGCAGTAGATGTTGTTATAAAGTTTGTTTATCACTTCAACCCGCACAATTCGTGACACCCTGGGTCAAGTTGGATGACATGAACATGAGACAGTGGACAGATCAGTGGACACTGTCTGCTACTCGCTTGAGGCAGTTACAGATGAGCCACTGA

Transcript

ENSOFVT00000008745

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9FMB4	AUGMIN subunit 5 OS=Arabidopsis thaliana OX=3702 GN=AUG5 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004161 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14817 all species →	HAUS5	HAUS augmin-like complex subunit 5	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029131 all species →	Family	HAUS augmin-like complex subunit 5	Interproscan
IPR044706 all species →	Family	AUGMIN subunit 5, plant	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR34968 all species →	AUGMIN SUBUNIT 5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0051225 all species →	Biological Process	spindle assembly	Interproscan
GO:0070652 all species →	Cellular Component	HAUS complex	Interproscan
GO:0005876 all species →	Cellular Component	spindle microtubule	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16588	HAUS5, AUG5; HAUS augmin-like complex subunit 5	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.