Gene detail

Detailed information of ENSOFVP00000008167.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_022802234.1, copine-3-like isoform X1 [Stylophora pistillata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000008871

GAGATTGCCACGCTACGAGATTTTATTCCTCACAGTGCCTGACATCAACCACGTACGAAAAGTCTGCTGACAAACAGACGCAAAAACAGCTGGAAATGGCAGATTGTGTAACTCGCGTAGAACTTCATGTGTCCTGTAGAGGACTGCTTGATAAAGACACTACTTCAAAATCAGATCCATTATGTGCCATGTGTATTCAAGACGCACACGGGAAATGGGTAGAGCATGCTAGAACAGAAAGAGTGAAAAATAACCTCAACCCTGATTTTGCCAAAGGGATTGTTGTGGATTACTATTTTGAGATGGTACAAAAACTCAAGTTTGCTGTTTACGATATCGATAACGAGACAAGCGCTTTGGGAGATGATGATTTTCTGGGTGACATGGAATGTAATCTGGGTCAGGTTGTATCAAAGAAATCATATGCAAAGACTCTCCAAATACATGGAAGGCAAGTTGGAACAATAACAGTATATGCAGAAGAATTAAAAGGAGCTGGAAATGAAATAGTTCAGTTGACATTCAGAGCTTCAAACTTGGATAAAAAAGACTTTATGGGAAAGTCAGATCCTTTTTTGCAACTGTCAAAATTGAAGAGTGATGGTGGAACCTTGCTCGTTCATCGAACTGAGGTTATCAAAAATAACCTGAATCCATCATGGCAGTCCTTTAACATCTCGCTTCAAACTCTCTGCAGTGGAGACTATGATTCAACAATCAAGATTGGCTGTTACGACTGGGATGAAGATGACAATAATGATTTGATTGGTTGTGTGGACCTAACCCTACGACAACTGATTGACGCTAAAGAATCTGGGAAAGGGCTTGACTTAGTGAATGCcaagaaaaagcaaaagaagaaaggATATGTGAACTCTGGAGTCCTGTACGTCGTCCAGTGCAATATAACCAAAGTTCACACATTCTTAGACTACGTTATGGGAGGATGTCAAATTAATTTTACaGTTGGCATAGACTTCACAGCATCTAATGGTGATCCAAATCACCCGCAGTCATTGCATTATGTTAATCCCTATGAACCTAATGAGTACGTCAGGGCTCTGGTTGCTGTTGGAGAGGTCTGCCAAGATTATGACAGTGACAAGTATTTTCCAGCGTTAGGATTTGGAGCAAAAATACCTCCAGCGAATCAGGTTTCCCACGAGTTTCCGTTAAATTTCAACCCCACCAACCCGTATTGTCACGGTATCCCTGAAATTGTCGCCGCTTATCAGAATTGTATTCGTCAAGTACAGCTTTATGGCCCGACTAACGTCTCACCGATCATCAATCACGTGCTTAGATTTGCCGAGCAGGCGGCCAAGGAAAACGCGGCGTCGCAATATTACGTTCTGTTACTATTGACTGATGGCGTGTTATCGGACATGGAGGACACAAAAGCCGCTATCATCAAAGCCTCTCGCCTGCCCATGTCGGTGATTATCGTTGGAGTTGGTAAAGCTGACTTCAAGGACATGAACGAACTTGACGCTGATGAAGGAAGGTTAAGATGTGGCCATCATTACGCTGACAGGGATATTGTGCAGTTTGTGCCTTTTAGAGATTTTAAAACGCAATCTCCAGCACTCCTTGCTAAACACGTGTTAGCAGAAATACCCAAACAAGTTCAGGAGTACTTCAGCAAGAAGGGCCTCGCTCCCATGCCACCAAAAGGACCAGCTCCTCCCTCCTTGGGAGCTCTTTAGTGTCTCAGTTTGACTTCATTCGTGCAACTTCGGTTAATCGAACTGATTCGATTCCATCAATATAGTTCACTGGCAACGGCTATCATAGCTAAAAGTGTTGCTAAAAGTAGGTGTAGTTCTTTTATCAGGGGAAAAAATGTGCAGTCTCAAAAGGCTGGAGAAACGAGTGGGATGGCGGAATTTGTTCCTCATAGCCGAATGTTTACTATACCGGAAATCGTTTAACCGGGGTTGCACGTTAGTTTAGAATTTTACCTTAAGCTGTGTTTTCGGTGTTTTTCATAAAACCAGGAATTTAATTATTAGTTGCATTATCTGCAATAGTTAATCCATACTTTACAAGTTTCATTGGGTGACTAGACACAAACAAGGAAGGACTATGTGTAGAGCAGTGATTTGAACATTTGCGGTTATTCTTTCTACggactttaaaaacttgaatactTGGACTTGAATACAGGCACAATGACATGTAAACTGGAAACAGAATTACTTGAATCCAGTTTTCGATTCGAGCCTTTGTCACCGTGACCGAAAACGCGAAGAGTCTGTGAACGAGATTGTCTTCCGGGTTCTCGGAAAGGAAACAACTGTGCGCATGCTCGTAGCCACGATAGTGCATTTGAATGTATCCCATATTGTTTAGCAAATATAGCTACCCCTAACATACCTTATAGAATTAATGAGATTTCTCACGAGATCAAAACTTGGAGATTATTCATGGTTTTGATAGAATCGTAACACTAGTGAATGTTAGGGAAGAACGAGGAAATCTGTGAACTCGGATTTCCACTTGCTGTCAGTTTTAAGTTTCAGTGCTATTAGGAGTGTTTTTAGGCGTGTTGCTACTTTGAACTATATATAATGTAATGTTAGTTTTGCACAAGGCATTATCTTATTACAAAGCACCTcacccaccccctccccccaccctgCACTTTCTTAGCATTGCAACTATATTCGACAGAAATTTCTGAGCTGGAAAATGGCTATTTGATT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O75131	Copine-3 OS=Homo sapiens OX=9606 GN=CPNE3 PE=1 SV=1
Q8BT60	Copine-3 OS=Mus musculus OX=10090 GN=Cpne3 PE=1 SV=2
Q5RAE1	Copine-3 OS=Pongo abelii OX=9601 GN=CPNE3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000550 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168 all species →	C2	C2 domain	Domain	Interproscan
PF07002 all species →	Copine	Copine	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036465 all species →	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR037768 all species →	Domain	Copine, C2B domain	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR010734 all species →	Domain	Copine, C-terminal	Interproscan
IPR002035 all species →	Domain	von Willebrand factor, type A	Interproscan
IPR045052 all species →	Family	Copine	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10857 all species →	COPINE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005544 all species →	Molecular Function	calcium-dependent phospholipid binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0071277 all species →	Biological Process	cellular response to calcium ion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24524	CPNE1_2_3; copine 1/2/3	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.