Detailed information of ENSOFVP00000008471.1 in Cyphastrea salae

Genomic Location: chr10:5997554...6028786
NR annotation: XP_020600476.1, sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4LDE5Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SVEP1 PE=1 SV=3
P0C6B8Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Svep1 PE=1 SV=1
A2AVA0Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Mus musculus OX=10090 GN=Svep1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000918 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00084
all species →		SushiSushi repeat (SCR repeat)DomainInterproscan
PF00008
all species →		EGFEGF-like domainDomainInterproscan
PF12661
all species →		hEGFHuman growth factor-like EGFDomainInterproscan
PF00354
all species →		PentaxinPentaxin familyDomainInterproscan
PF02494
all species →		HYRHYR domainDomainInterproscan
PF07699
all species →		Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001759
all species →		FamilyPentraxin-relatedInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR003410
all species →		DomainHYR domainInterproscan
IPR000436
all species →		DomainSushi/SCR/CCP domainInterproscan
IPR035976
all species →		Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR013032
all species →		Conserved_siteEGF-like, conserved siteInterproscan
IPR051355
all species →		FamilyNotch and Slit guidance proteinInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR011641
all species →		DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45836
all species →		SLIT HOMOLOGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0007411
all species →		Biological Processaxon guidanceInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOFVP00000008471.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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