Gene detail

Detailed information of ENSOFVP00000009063.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020614698.1, succinate dehydrogenase [ubiquinone] cytochrome b small subunit B, mitochondrial-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9CXV1	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial OS=Mus musculus OX=10090 GN=Sdhd PE=1 SV=2
Q6AZV0	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit B, mitochondrial OS=Xenopus laevis OX=8355 GN=sdhd-b PE=2 SV=1
Q6PCT8	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdhd PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008909 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05328 all species →	CybS	CybS, succinate dehydrogenase cytochrome B small subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007992 all species →	Family	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, CybS	Interproscan
IPR034804 all species →	Homologous_superfamily	Fumarate reductase/succinate dehydrogenase, transmembrane subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13337 all species →	SUCCINATE DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005740 all species →	Cellular Component	mitochondrial envelope	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005749 all species →	Cellular Component	obsolete mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	Interproscan
GO:0006099 all species →	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0006121 all species →	Biological Process	mitochondrial electron transport, succinate to ubiquinone	Interproscan
GO:0008177 all species →	Molecular Function	succinate dehydrogenase (quinone) activity	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan
GO:0048039 all species →	Molecular Function	ubiquinone binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00237	SDHD, SDH4; succinate dehydrogenase (ubiquinone) membrane anchor subunit	-	Non-alcoholic fatty liver disease	ko04932	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.