Gene detail

Detailed information of ENSOFVP00000010350.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: PFX18140.1, Trafficking protein particle complex subunit 11 [Stylophora pistillata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

ENSOFVT00000011133

atggcggctgctAGTGAGTTTCCGACAGAATTGGCGACGCGGCCACTTGGTCTTATAGCTCTGATGGGGCTCGACATAAATCAGAAACCCTTGCATAAGGCTATCTGGGAGTCTTTCTCTGTCAATAGGCATCTTGAGAGAGTTCCACTTTCTTTCCGACTTTTGCCAATTGATCACGAGTTTCCCAAAGCCAAGTCGAAGCGTTCTACGTATGAGTGGTATTTACCAAAGGGCATCCTGAAAACTAAATGGATGCACAAGCATCTTTACCTCACTCCAGCTGTTGTGGTCATGTTTTATGAACTGGACTGGGACGACACTCAGTGGAAAgacaaacaaactgaatgtgctTCAAAACTGGAAAAAGTCAGCAGAAGTAGTCTCCAAGACCAGAACACCAAGGTAGCTGTTGTGCTGATTCAAAAGAACGCACCTCTTCCACCTGGTGATGacctacaggcactggaaagggCAGCTACACTCTGCAGTGCATGTGATTTGTCAGCCAAGTCTCTGTTTGTTCTTCCACACACAGACCATTTGATTGGTTATACAATCAGGTTAGAAAATGCTTTCTATGATTTAGCACAGAGTTACTATCATGGAGAATGTAGAAGAGTTAAAGCTCACAAGGAGTTTCTTAACAAGGGAACTCATCAGCTGCTATTGGTACGACACCAGTTTAAGGTTGCCTTCTTCAATGAGCTTCGACAGGACCCCCATTCTGCCATAAAGCACTACAGGCAAGCCTACAGTCTCTTAGGAGAGCTCAAATCAAGTGACATCAATATGCTAGAGATTAAAGTTGTTGCTGGCTTTGTCAATTATAAGGTTTGCGTTTCCAGAATTGAAATGTTTAAATACAATGGGAATCATACAATTTATTTTAAGTATAATTATTGTAATAGTACAAAGTTAAATGTCACAAGAGCTAAAGAGGTCCTATTTTCTGATAATTCTTCAATGCAGATTTGTCGTCTGAGTTTCCAGGCATCAGCTCCATTAGATGCCATTTCACAATTCAGAAAACATGTTGATTTGTTCAAGGAGAAAGTTGGCTGCCCTGAATTGGCATTTGAACACTCAGCCTGGCTCTCTAAACAGTTCAGTTTATTTGGAGAACTGTTTGATGAAGCCATCAGGAATGGGCTGACAGCATTGCAGACTCAACACCCAGGGTTCTACTACCAACAAGCTGCCAATAATGCTATTGTGAGGAGGCAGCTATGTCAGGGTTTGTGCCATACAACCACTCCACTGTCCATGAATCCTCTGGAAAATGCTGGAAACTTGGACTTTTTTGGTCAGAGACCATGGAGGCAAGGATTTCAAGGAGCAGAGCCCCCAGATGCTGCAATAGAGCATGCTGGAATCATTTCACTGCAGGCTCAGGAAATGCAAGTGGACCACTCAtgGATCATCATCCCGCTTCTCAGCAGTGCAGTGGCTCAGTTTAAAAAGTACAAGTCACCCAGAATGAAAAGATATCTGAGTAAGCAGTACTCTTTTTACCTTGAGTTtgtctTGGTACAGATGGGTGAGGAATATTACCATGCTAGAGACTACAGCAAGaTGCTGCTTAGAGAAAACTTCATAACACTcaagatctcactctgtttgttTTTCAGGTTGTTGTGTAGAGTCACTTGGGATTACCGCAGAGAAAAATGGTGGTCACTTCTTACCTCAGTGTTAATCACGTCACTGAGGTGTGCTTATCTTGTCGGAAATGTGCAAGAGTACATCACTCTTTCACTTGAATTAATGGGACGATGTATCCTTTCAAACAATGAATGCCCTGAACCCGAGCCAGGATGTGACTTTGAAGCAGTAGAAGAAGCAAAGGAATTGTGGAAAACACTGAAGGCGTCACCACAGACACCCCAGGTGTTTACTATACAGATGGAACAAATAGCACCATTTGGTGAGAATGATGGTTTATTGCTGTTTTCTTCAGCAATCAGGTTATTTTATAATCAGCAGTGCGTAGTGGAGACTGGATTGACTCAAGGAGAGGGCGGATTGTATCTCTTACCAGCTAAAACCAAGGTCATTCCATTCCAGCTTGTTCCTCAGCCAGAGGATGTGGGAAAACAGCTTCAGGTCACCTCTGTCGCTCTGGAGTTGGGCTCCCGTGGGTCCCGGTGTGCTGTGCTTGTGTGGAGTGGTTGGGGAGGGGAGGCTGCCTCTACCAACACCTCCTTTGTCTCGTACGGCTTAAAGTCCGCAAGCAAAGAAGATCAGATCGATTGGGATGATTTAAAAGCTGTCTCAAAAATCAAAATTGAAGCACGGAAGCCTAAAATTGAAGTAAAACTCAAACATGAACCTCCAGCTCTGGTAAACGAGTTTTATGAACTTCAGCTGCTTGTTGAAAGCTTAGAAGAGACGCCTGTAAAAGACCTCAGAGTCTGGCTAGGATTTCAGGACGAACACGAGACTGCTGAGGGTGAGCAAAACGACGTTACCGCTGTGTGCATTTCTTTGCAGATTTCCTACTCTGTTGACATGCAAGTAGAGCCCAACTCTCCATCTGTCACCTGCACTTGTGTAAAGGAGGACAGTGTGGTTATCAAGACTGTCATGccatttgaaatatctctttccTTAACAAACCTCAAGCTTGAAAGACTAGACCAAGTATTTGAAGAGGAACCATTTCTCTTATTGGCTGGGATCAAATGCACTTCACCGTGGCCTGTTACCATGGTTACCACCATCCTTAATATGtctcCAGAAGTTAATATCATTGGCGAAGAGATCGGATCCCAGCTACAAGGAATCTCCTTGCAGCAGGGTGAGAGTGCATCAGAGTGCTATTGCTTGGCTGTCAGGGAGGGGGTCAGTAAAATGAAAGTCGTTTACATTGGTAGCCTCGCTCTCCAGTGGAGGCGAACGTCTGCGGATGATGGATTTCCTGTTGTGGTCACAGAACTTACTTTCCCGTCAGTCACAGTGGAAAGTGTGCCATTTACTATCCAAACAGATTTGCCCGCGTATGGCTGTGTTCAGACTCCTCTGTCCGTAAGCTATCTCGTCCGAAATAGAACTCTTCAGGTTCAGGAGGTCGAGGTCACAGTGGAGCCAAGTGACGCTTTCATGTATTCAGGTCACAAACAGATTCAGTTCCGTCTGCTGCCCACTGGTGACCACAGGCTCAAGTTTAGCTTGTACCCTCTTTGCGCCGGCTTCGTAACCCTTCCCAAGCTGCATTTCAACCTGCCTCGCTTTCAGGTTAGCTGGGATGAGCATGCGCAGAAAATGATTCCATCCAATGTATTCATAAAGGTAAGGAATCCTTCTTTTCAAGAAGCGAAAACAGAGTTTTGCTCGAATTGCCGTCGAGACATTCCTGCTGCCAACTATGTTATGCATGTGACTCATTGCCAGAGGAATCTAACATTATGTAAGGAGTGTGGAGAACCTGTTCCCACTTCACAGCAAGAAGAGCATTTTGAAGAATACCATGCAAAGGAAAAATGTGATTGTGGTGAACTTGTGGAAAAAATGAACCTTGAAGAGCACAAGGAAAAGGATTGTCCAAACCGTGGTGTGGAGTGTCAGTATTGTGAGCTAACACTTCCTTTCAATAAAATGGCTTCTCATGCAGAATACTGCGGCAGCCGAACTGAGAAATGTGACATATGTGACAaatttattcaaatgaaggaCTTAACTGAACATGTGAACACTGGATGTCAGTACCCTCCAGTGAAAGAAGAAAGTAAAAAATTGCCCTCCAATCTGCCACCTGACTTTTTGTGTGATATGCCTGTTGGCATGATGCATGCTATGGCGCTTCAAGCTGGAATGCATGAGTTTGGACGTATTATCAGCACTGGACTTGGTACTTCACCATTTAGTGATCCACGTATGCAGTATCCCGGTGGAGCAGCTTATTTTGGTGGCATGAGTACTGGAAATGGTGTGATTGATGGTAGTGATGTAATTTCCCGTGGAGCAAAGAGAAGCAAAGAGTTTCCAAAACCTGAATTTGATCGGCGCTTCAGTCAAGATTTTGATAAGGTTGATGATGATGAGTATACGCAGGacattgatgatgatgaaatgGTTGCAGCAGCATATCAGGCAGATGAGTTTGACAATGTTGATGAGGATGTTAATGGCATGTCCTCTGCAATGGTTGATGAGACTTTTCCATATATGAAATCCACACTGATGGCCGATTCAGTAAATGGTAGGTATCATTCCATAATTTGGTTGCTTCTATGTTACCTAAAACTGATATAG

Transcript

ENSOFVT00000011133

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZI89	Trafficking protein particle complex subunit 11 OS=Gallus gallus OX=9031 GN=TRAPPC11 PE=2 SV=1
A6QLC7	Trafficking protein particle complex subunit 11 OS=Bos taurus OX=9913 GN=TRAPPC11 PE=2 SV=1
B2RXC1	Trafficking protein particle complex subunit 11 OS=Mus musculus OX=10090 GN=Trappc11 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003086 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12742 all species →	Gryzun-like	Gryzun, putative Golgi trafficking	Domain	Interproscan
PF21366 all species →	TRAFD1-XIAF1_ZnF	TRAFD1/XAF1, zinc finger	Domain	Interproscan
PF11817 all species →	Foie-gras_1	Foie gras liver health family 1	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025876 all species →	Domain	Trafficking protein particle complex subunit 11, C-terminal	Interproscan
IPR049439 all species →	Domain	TRAFD1/XAF1, zinc finger	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR021773 all species →	Domain	Trafficking protein particle complex subunit 11	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14374 all species →	FOIE GRAS	Interproscan

Gene Ontology

No Gene Ontology signature was detected for ENSOFVP00000010350.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20308	TRAPPC11; trafficking protein particle complex subunit 11	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.