Detailed information of ENSOFVP00000011000.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: CAH3108449.1, unnamed protein product [Pocillopora meandrina]
Species Cyphastrea salae · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7KZ85Transcription elongation factor SPT6 OS=Homo sapiens OX=9606 GN=SUPT6H PE=1 SV=2
Q62383Transcription elongation factor SPT6 OS=Mus musculus OX=10090 GN=Supt6h PE=1 SV=2
Q8UVK2Transcription elongation factor SPT6 OS=Danio rerio OX=7955 GN=supt6h PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003299 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14639
all species →
YqgFHolliday-junction resolvase-like of SPT6 DomainInterproscan
PF14632
all species →
SPT6_acidicAcidic N-terminal SPT6FamilyInterproscan
PF14635
all species →
HHH_7Helix-hairpin-helix motif DomainInterproscan
PF17674
all species →
HHH_9HHH domainDomainInterproscan
PF00575
all species →
S1S1 RNA binding domainDomainInterproscan
PF14633
all species →
SH2_2SH2 domainDomainInterproscan
PF14641
all species →
HTH_44Helix-turn-helix DNA-binding domain of SPT6DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010994
all species →
Homologous_superfamilyRuvA domain 2-likeInterproscan
IPR017072
all species →
FamilyTranscription elongation factor Spt6Interproscan
IPR012340
all species →
Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR028231
all species →
DomainTranscription elongation factor Spt6, YqgF domainInterproscan
IPR028083
all species →
DomainSpt6 acidic, N-terminal domainInterproscan
IPR035018
all species →
DomainSpt6, SH2 domain, C terminusInterproscan
IPR032706
all species →
DomainTranscription elongation factor Spt6, helix-hairpin-helix motifInterproscan
IPR036860
all species →
Homologous_superfamilySH2 domain superfamilyInterproscan
IPR041692
all species →
DomainHHH domain 9Interproscan
IPR003029
all species →
DomainS1 domainInterproscan
IPR037027
all species →
Homologous_superfamilyYqgF/RNase H-like domain superfamilyInterproscan
IPR000980
all species →
DomainSH2 domainInterproscan
IPR012337
all species →
Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR035019
all species →
DomainSpt6, SH2 domain, N terminusInterproscan
IPR042066
all species →
Homologous_superfamilySpt6, Death-like domainInterproscan
IPR035420
all species →
DomainSpt6, SH2 domainInterproscan
IPR028088
all species →
DomainHelix-turn-helix DNA-binding domain of Spt6Interproscan
IPR023323
all species →
Homologous_superfamilyTex-like domain superfamilyInterproscan
IPR023319
all species →
Homologous_superfamilyTex-like protein, HTH domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10145
all species →
TRANSCRIPTION ELONGATION FACTOR SPT6Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0140673
all species →
Biological Processtranscription elongation-coupled chromatin remodelingInterproscan
GO:0006368
all species →
Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0008023
all species →
Cellular Componenttranscription elongation factor complexInterproscan
GO:0031491
all species →
Molecular Functionnucleosome bindingInterproscan
GO:0034728
all species →
Biological Processnucleosome organizationInterproscan
GO:0042393
all species →
Molecular Functionhistone bindingInterproscan
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0006139
all species →
Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11292SUPT6H, SPT6; transcription elongation factor SPT6-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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