Gene detail

Detailed information of ENSOFVP00000011354.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: CAH3109055.1, unnamed protein product [Porites lobata]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

ENSOFVT00000012318

ATGGACAGTTACAACTGGAATTACCTGGACCAACACATTTGTGGAGAATTTGATGAACTCATCGAGtCTTTAAATTACTGGAAGGCTCGCTTTCTCCTGCTGCCGTCCTCGCCGTTTTCGCAGCGTAAAATTAAAGACGAAGGATGGGGAGATAAGAAGAATAGAAGTTCACAAGAAGACAGTGTTTTGGATGGAATTCTGAGATTTCTTGAGGTCCTTAATCGAATAAAACGTCTTCAACCTCAGAAAGTGCCGCAAACGCCCAAGGAACGAAAGCAGTCTGAGGCTTCTACGCCATCTCGTCGCATAAGCAAACAGCACGAGCACAAAACAGCCCGACCCCTATCCTCTGAGTTAATCGTACCCAAGGATAGCAGCTCTACACCCAGTAGTCCGCTGGCTATAAGATCGCGGTCGTCCTCGGCAACGGGGGATGACTTGGCTTGTCCGGAtactcgtgccagtccttctcgaGAATTAACCAGCGAGCAGCTGAAAACAATGGACGAGTCAGGAATGAAGTCGGAGAAAGAAAGGCTTAGTGTAGAATCACCGCTGGAGAGTGTAGCAGAGGCCATGCTGGATTCTGGAAAAGGTTTGACTTTCCTACCAGAGCTAAAGGGACTGAAGCCTTCCAGCTTTCTAAGCGTCGAGGCGATATCGTGGATTTCAAAGAATGTGGATGGAGTCAATTCTAAGGAGCAAGCCATTCAGCTGTGCCAGAAAATGGTGGAGGCAGGCTTCATTCAGCATGCTTCAGAAAGCGCCAAGCAGAACTTAGTAGAGGGTTTTATCATATTCTGTTTCACACCAAAATCGTCTTGGGTGGAGAAAAAAGAGGATATCCTGTTCACCTCCAAGTTTCCCGCGCCTCACCGAAGCTCGATCGACGTGGAGCGTTTTGAGTTCGATCTTTTACGAGCCTTTCAAATGGAATGGTTCGAAATCGCTATTTGGCCGCGCAAGACTAGTGAAGAGGTCCCAGAATATTTAGCACCAGATCAAGTGATTGATTCATTTCCGACTAGTTCTCCCTACCGGAAGCCCAACCGAAATAGATCAGCCCGTCGGAATCAACGAGGACGTTTGCATTCAGACAGTGACTGCGGCTGTGGCCCCGCCTACAAGTTCGTCACGCTAGACGCCGATCCTCATCATAAAAGTCAACGCCCGGAAACTTGTACTgttcgttaccatggcaactaCTGTGCCCTTCATGCGTTTGAGGTAGAACTGCACTGGATAGCGGCAACTGGGTGCATTGTAAACGACATGGTTCATTCATGGACTCGGAAAGCGCCCTCCTGTGGATTTCACTTAGTCCCCGTTCCAGTTAGTCCATTCCCTGATCCTGTTGGTAGAAATGTTGATCCTTTTCGTTTGCCCGTTTTTATTCCGCTGAACTTTTCTGACTGTACTGCAGACGGATGCGGCTTATTTGAAGATTTTGATCCCTCTACTCGAAGTCTCAGAATGTCCTTATTCCTGGAAGCCATTCTTCAAAGGTTTGGTTTTATCCGGGACTCGCCGTACGGCTCGATGCACGTGAGTTCTCCGATGGTGCAAGTTACTCCCGTGCAGTGTCGCGCGAACGACTATGTACACACAAGCGGCGTCGCCTTTGTTCGAATCCTTAACTTGGACGAAGAGGAGGATCCGTTCACAAATGGCCTGTCCAAGCTAGAAGTGGAACAACGGTCAAGCGATTGCTGGGGCTTCCACTGGACGCATAACTACATGCTCACAAGGCGCTGGCGGTCTGCGGCCACGGGAGACAGTGAGGCCGCCAATACTCTGAGGGGAGAAGTGGAGGACTTCTGTGCCGACAAGAATGGCGCTCTGAGGACGTTCTGGGAGTCTTGTACGGAAGCTGCGAGAAAAGCGTTGCAGAAAAgggaagaggaagaggacaAACCTGAAACGAAAAAGAACGACGAAAAACGGTGTGAGCTTAATAAGAATGGAGACCGTCATGATTCACCTGAAGTGGAAGATACAGAAAGTTCGACTTCCCCATCTAACAACAAGACTACCCCGCACACAGACGCTCAGAATATGTGA

Transcript

ENSOFVT00000012318

GTTCGAACCAAATCAAGGAAGATTCCTGCGCGAAGAAATGGACAGTTACAACTGGAATTACCTGGACCAACACATTTGTGGAGAATTTGATGAACTCATCGAGtCTTTAAATTACTGGAAGGCTCGCTTTCTCCTGCTGCCGTCCTCGCCGTTTTCGCAGCGTAAAATTAAAGACGAAGGATGGGGAGATAAGAAGAATAGAAGTTCACAAGAAGACAGTGTTTTGGATGGAATTCTGAGATTTCTTGAGGTCCTTAATCGAATAAAACGTCTTCAACCTCAGAAAGTGCCGCAAACGCCCAAGGAACGAAAGCAGTCTGAGGCTTCTACGCCATCTCGTCGCATAAGCAAACAGCACGAGCACAAAACAGCCCGACCCCTATCCTCTGAGTTAATCGTACCCAAGGATAGCAGCTCTACACCCAGTAGTCCGCTGGCTATAAGATCGCGGTCGTCCTCGGCAACGGGGGATGACTTGGCTTGTCCGGAtactcgtgccagtccttctcgaGAATTAACCAGCGAGCAGCTGAAAACAATGGACGAGTCAGGAATGAAGTCGGAGAAAGAAAGGCTTAGTGTAGAATCACCGCTGGAGAGTGTAGCAGAGGCCATGCTGGATTCTGGAAAAGGTTTGACTTTCCTACCAGAGCTAAAGGGACTGAAGCCTTCCAGCTTTCTAAGCGTCGAGGCGATATCGTGGATTTCAAAGAATGTGGATGGAGTCAATTCTAAGGAGCAAGCCATTCAGCTGTGCCAGAAAATGGTGGAGGCAGGCTTCATTCAGCATGCTTCAGAAAGCGCCAAGCAGAACTTAGTAGAGGGTTTTATCATATTCTGTTTCACACCAAAATCGTCTTGGGTGGAGAAAAAAGAGGATATCCTGTTCACCTCCAAGTTTCCCGCGCCTCACCGAAGCTCGATCGACGTGGAGCGTTTTGAGTTCGATCTTTTACGAGCCTTTCAAATGGAATGGTTCGAAATCGCTATTTGGCCGCGCAAGACTAGTGAAGAGGTCCCAGAATATTTAGCACCAGATCAAGTGATTGATTCATTTCCGACTAGTTCTCCCTACCGGAAGCCCAACCGAAATAGATCAGCCCGTCGGAATCAACGAGGACGTTTGCATTCAGACAGTGACTGCGGCTGTGGCCCCGCCTACAAGTTCGTCACGCTAGACGCCGATCCTCATCATAAAAGTCAACGCCCGGAAACTTGTACTgttcgttaccatggcaactaCTGTGCCCTTCATGCGTTTGAGGTAGAACTGCACTGGATAGCGGCAACTGGGTGCATTGTAAACGACATGGTTCATTCATGGACTCGGAAAGCGCCCTCCTGTGGATTTCACTTAGTCCCCGTTCCAGTTAGTCCATTCCCTGATCCTGTTGGTAGAAATGTTGATCCTTTTCGTTTGCCCGTTTTTATTCCGCTGAACTTTTCTGACTGTACTGCAGACGGATGCGGCTTATTTGAAGATTTTGATCCCTCTACTCGAAGTCTCAGAATGTCCTTATTCCTGGAAGCCATTCTTCAAAGGTTTGGTTTTATCCGGGACTCGCCGTACGGCTCGATGCACGTGAGTTCTCCGATGGTGCAAGTTACTCCCGTGCAGTGTCGCGCGAACGACTATGTACACACAAGCGGCGTCGCCTTTGTTCGAATCCTTAACTTGGACGAAGAGGAGGATCCGTTCACAAATGGCCTGTCCAAGCTAGAAGTGGAACAACGGTCAAGCGATTGCTGGGGCTTCCACTGGACGCATAACTACATGCTCACAAGGCGCTGGCGGTCTGCGGCCACGGGAGACAGTGAGGCCGCCAATACTCTGAGGGGAGAAGTGGAGGACTTCTGTGCCGACAAGAATGGCGCTCTGAGGACGTTCTGGGAGTCTTGTACGGAAGCTGCGAGAAAAGCGTTGCAGAAAAgggaagaggaagaggacaAACCTGAAACGAAAAAGAACGACGAAAAACGGTGTGAGCTTAATAAGAATGGAGACCGTCATGATTCACCTGAAGTGGAAGATACAGAAAGTTCGACTTCCCCATCTAACAACAAGACTACCCCGCACACAGACGCTCAGAATATGTGAAGTTAACCATAGTTAATATGAAGCCAGTACTCGAATCAACATGCGTTTTGAATCAATTGGTCTCGAGAACAGAATCAGTTTAGCAAGGAAATTGAATATTAGTGAGGACTGAAAATGTTGGACTgcaaaacttgacaaatttatttttttacgtaaAAATGTTTCGCGATAAATGAGTTGCAGTGTTCGGAACTATTTTAGGAACTTTATGGATTTCTCTCAAATGGCCGGGGACCACAAAATAAGTAAAGTAAAGGTGAACAGGAAACAAATGTGTAAATACAACAGCTAGAAAGAATAAAGGGCGAGAGAGTTAATCACCATATAGGACTTATTCCCAAGTTAATTCCTCTCGAGGTATTTTTAGATAtggctgttattattatttctaaAGCCCCGATAATTCATAAACGATTACCTTAGGAATAATTCCTACATTGGGAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O75140	GATOR1 complex protein DEPDC5 OS=Homo sapiens OX=9606 GN=DEPDC5 PE=1 SV=2
P61460	GATOR1 complex protein DEPDC5 OS=Mus musculus OX=10090 GN=Depdc5 PE=1 SV=2
Q4PE51	Vacuolar membrane-associated protein IML1 OS=Mycosarcoma maydis OX=5270 GN=IML1 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003122 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19418 all species →	DEPDC5_CTD	DEPDC5 protein C-terminal region	Family	Interproscan
PF00610 all species →	DEP	Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027244 all species →	Family	Vacuolar membrane-associated protein Iml1	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR000591 all species →	Domain	DEP domain	Interproscan
IPR045838 all species →	Domain	DEPDC5, C-terminal	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13179 all species →	DEP DOMAIN CONTAINING PROTEIN 5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0005765 all species →	Cellular Component	lysosomal membrane	Interproscan
GO:0010508 all species →	Biological Process	positive regulation of autophagy	Interproscan
GO:0034198 all species →	Biological Process	cellular response to amino acid starvation	Interproscan
GO:1904262 all species →	Biological Process	negative regulation of TORC1 signaling	Interproscan
GO:1990130 all species →	Cellular Component	GATOR1 complex	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000011354.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.