Gene detail

Detailed information of ENSOFVP00000012221.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020615805.1, vesicle-associated membrane protein 8-like [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q92356	Synaptobrevin homolog 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=syb1 PE=3 SV=1
Q32L97	Vesicle-associated membrane protein 4 OS=Bos taurus OX=9913 GN=VAMP4 PE=2 SV=1
O75379	Vesicle-associated membrane protein 4 OS=Homo sapiens OX=9606 GN=VAMP4 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001916 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00957 all species →	Synaptobrevin	Synaptobrevin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001388 all species →	Family	Synaptobrevin-like	Interproscan
IPR042855 all species →	Domain	v-SNARE, coiled-coil homology domain	Interproscan
IPR016444 all species →	Family	Synaptobrevin/Vesicle-associated membrane protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45701 all species →	SYNAPTOBREVIN FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0005484 all species →	Molecular Function	SNAP receptor activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006906 all species →	Biological Process	vesicle fusion	Interproscan
GO:0019905 all species →	Molecular Function	syntaxin binding	Interproscan
GO:0031201 all species →	Cellular Component	SNARE complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000012221.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.