Detailed information of ENSOFVP00000012396.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020628762.1, nuclear pore complex protein Nup153-like isoform X4 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P49791Nuclear pore complex protein Nup153 OS=Rattus norvegicus OX=10116 GN=Nup153 PE=1 SV=1
E9Q3G8Nuclear pore complex protein Nup153 OS=Mus musculus OX=10090 GN=Nup153 PE=1 SV=1
P49790Nuclear pore complex protein Nup153 OS=Homo sapiens OX=9606 GN=NUP153 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004961 (this species only)
Ubiquitin familyUBD|ZnF|NZF · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00641
all species →
zf-RanBPZn-finger in Ran binding protein and othersDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036443
all species →
Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan
IPR001876
all species →
DomainZinc finger, RanBP2-typeInterproscan
IPR026054
all species →
FamilyNuclear pore complex proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23193
all species →
NUCLEAR PORE COMPLEX PROTEIN NUPInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005643
all species →
Cellular Componentnuclear poreInterproscan
GO:0006405
all species →
Biological ProcessRNA export from nucleusInterproscan
GO:0006606
all species →
Biological Processprotein import into nucleusInterproscan
GO:0008139
all species →
Molecular Functionnuclear localization sequence bindingInterproscan
GO:0017056
all species →
Molecular Functionstructural constituent of nuclear poreInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOFVP00000012396.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP