Gene detail

Detailed information of ENSOFVP00000012803.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: CAH3152645.1, unnamed protein product [Pocillopora meandrina]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000013827

CGGGAAGTCCACGTCAACATtttggcggccatcttgaatGAGTGGAGGAAGTTCGCAGAGGTTtatatcaaaagaaattttaatatGGGAGCAGGCCAATCCGCAGAAATCCCGGGCGGTGGATCAGAGGGATATCATGTGCTTAGGGTTCAGGAAAATTCTCCTGGATACAAAGCAGGATTAGAACCTTTCTTTGATTTCATCATTTCGATCGAAAACACAAGATTGGACCAAGATAATGAAACATTGAAGGAAATCTTGAAATCCAATGCAGAAAAACCTGTTAAAATGCTGGTTTTTAGCAGCAAAACATGTAAAGTTAGAGAGGTTAGCATCACTCCAAGTACTCTGTGGGGAGGACAGGGCCTTCTAGGTGTCAGCATTCGATTTTGTTCATTTGAAGGAGCTAATGAAAATGTCTGGCATGTTTTGGAAGTTCAACCCAACTCTCCTGCAGACATTGCTGGGTTACGATCAAATACAGACTACATTATTGGAGCTGATTCAGTTCTACATGAGTCTGAGGACCTGTTTCAACTTATAGAATCTCACGAAGGCAAACTGCTTAAACTATATGTGTATAATTCAGAAACAGATGGCTGTAGAGAGGTGACAATAACACCCAACAGAAATTGGGGAGGAGAGGGAAGCATGGGTTGTGGAATAGGATATGGCTACCTTCACAGAATACCTATCAGAGATTCCCTTGAGATGCCTCTCCAATCTAACTCATCCTCCCCTGCTCCAGATGGCTTCTCTGAAGTTCCTCTCATTGGGCCTACATCAGTACCTCTTGTCGCAGTTTCAACAGCAACTGTATCACCAATACAAGCATCAGGTCTTGAGACAGGGGTGGCTACATTGAACCTCAACACAACTGCAGTTTCACCGGCAATGAATCCATTTAGTACCAGTTTCCCATCAACTTCCCCTGCTACGACTGGCACATATCCAGTAGGTGCTCCCTCAGTAGCACCTGCAGGTGCCCCACCTACAGTTCCTTCATTCGCACCACAAGTCCAAGGCACACCCATAATTGGAGGTATGACCCCACCCTACATGCCCTTGGCTTCCATGAGCCCACCCCAAACATCAACAACACCCTCTGGAAGTTCCGCAGTTACTGTAACCGCAACAGCGACACCACTTATGACGGATATCACAGCAGGGGCCAGCCCAGCCCCCTTAATACCCACAACAGTTCCCACGTCGGCAAGTGAAGACATCCCAGCAGCATTTCAACCAACACCTCCACCTCAACCCATTGCTACATCGTAAAAGAACATAACTATAGACTTCAATGGAAAAGACATTATGAAAATCTATAAGGCTGTGCCATAAGGTTGGGAAGATCAAGTGGGACAAACATTGCAGTGTCACAGGTGATACAGCTCTTAATGTGGGTGTTGTGCGACACTGCCATGACAGCTCTACTGTGGATACTGTGTGACACTGTAATTTCTAGTTGGCTGTTCTGCCAACATAAGCCTGTCTGTTaggtagttttttttattattttgcgtAATGTTATTCTTTAACTAACTTTTATCATCAATCCTATCCTTTTGTTTGAATTTACGTTTTCAATCTTTACATTTGTAAAAGTGGCGGACCTAAATTTAATGCTGCACAGAATGCAGTAACTTTATCAGGCAAGCTAAGAGCCTTGCCTTTGTATGTATACTTTGGGTTTCAGATAATTGTCTCTGGAACAAAACTTGCAATTAAATTGTTGTGAATATAATCATTTACAATTGAAAGTTTTTTCCAACAATTTACTGGCAATGTTTTTAACTGTGTTAGTTCTTCAATAACCTTTACATGTATCAACATCAAAGCTAGTATCCCATACATGTAGctgttgattttctttattctggtCACCTTCTGCTTGAAAATGTATTCAATCTTGTCGGGAGAAATTAAACTTAGATCACTCTTGGAAATTGAGCTGGTTAAGGACAATAATAAAAAGGCCTGTATCATGAC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9H8Y8	Golgi reassembly-stacking protein 2 OS=Homo sapiens OX=9606 GN=GORASP2 PE=1 SV=3
Q99JX3	Golgi reassembly-stacking protein 2 OS=Mus musculus OX=10090 GN=Gorasp2 PE=1 SV=3
Q9R064	Golgi reassembly-stacking protein 2 OS=Rattus norvegicus OX=10116 GN=Gorasp2 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007408 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04495 all species →	GRASP55_65	GRASP55/65 PDZ-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024958 all species →	Domain	GRASP-type PDZ domain	Interproscan
IPR007583 all species →	Family	GRASP55/65	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12893 all species →	GOLGI REASSEMBLY STACKING PROTEIN GRASP	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0007030 all species →	Biological Process	Golgi organization	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26797	GORASP, GRASP65_55; golgi reassembly-stacking protein	-	Autophagy - animal	ko04140	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.