Gene detail

Detailed information of ENSOFVP00000013118.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020630261.1, cell division cycle protein 27 homolog [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

ENSOFVT00000014152

TTCCTTGCCGAACGACTTTTTGCAGAAGTCGGCTCTGATGATACTCTGTATCTTCTGGCAACATGTTTCTATCAAGCTGGTTACTGCAAGAGAGCCTACTCACTGCTACAAAGCAAAGGGTGCCCAACTCCACTCTGCCGCTTTCTATTTGCAAAATGCTGCATGGACTTAGATAAACTTGCCGAAGGTGAAATGGCTCTTACGGGAGGATGTCTGACTAATAGCAAGCCTCTGGAGACCATAGCATCTGAATTTGGTTCTGCAGCTGGTTATGGACTGGCCCTTTTGGGTCAAATATGCAGAAAATCAGAACAGTTTGAGAGAGCCGCAGAATGTTTTAAAAGCAGTCTGAAGTACAATCCATATCTATGGAGTTCATTTGAAAATCTTTGTCAGCTAGGAGAGAAGCCAGATCCTGCTGATTACTTTAAATCATCCTCCTGCCCAAAAATTACGTCTTCCATTTCAAACAGAGAACACATGACTGTAGGATCTTCCACCATCACCATGGATACCACAAGCCCATCAGAGAATCAGAGACGTAACAATGACTCGGTGTCCTCGGAAAATCTTGACCCTTCGCAGAATTTGACGCCACAAAACATTAGCATGCTAATTGGATCTTCTGTTCCTCCATCTAGACAAAGCTCAATTGAAATGTCAGGTAGCAGTTTTGCTGTGCAATCTGCGGCTGTCAGTATCGTGGGCGAAAAGAGAATGCGTCAGAGGGTTGGTAGAAATCTATTAGGATCCACACAGTCATCAAGTCCGCTAACGCCAAGTTTTGGAATGCTGGCATCGGATACACCCACTAATGACCAGAATACAGTGTTATTTATCACCCCATCTCCTACTGTAGGTGAAAGCCATGCCCCTAAAGCACCTCTTAAaaagGGAGGAAATCGAAGAAGTGATTCATTGGCTAAACCTGTGACAGCCATCACATCTAGTGTCCACAGTGTGCATTCGGCGTCAACTCTATTTACATCATCTCCTCATGGCTCTGGACATCAAAACTTCTCATCAAATGTACCCAGTGTACGACGAAGCTCAAGACTGTTTACACTGACTTCTGGTAACAGCTCCGTCAGTAGTTTTGATTCAAATAACAAAGATCGAAGAACAAAAAGTGCCAGAGTTTCTTCACCTTCATGTAGAACTGCTGTTAGTAATGTTGTAAAAAAGACTCGACGTCAAACAAGAAGCTCCACCCCTCAGCCATTGGCTCCTTGTGTTGAGAATGTTATTCAGGAAGAATCATCAGCACAACAAAACACAGAGGGGAAGGGTCAGGGGAAATTGTCACCCATTCAAAGCAGTATGGATGGGTTGATGTCGCTATTGAAGCAGATAGGCCAAGGATATGTCCACCTTAGCTCGTATGAATGCAAACAGGCATTAAATGCCTTTTCATCTTTAGCTCCACATCATTACAACACAGGATGGGTATTGACGCAAGTGGGGCGGGCCCACTTTGAACTAGCAGAATATCAACTGGCTGAGAAAGTTTTTGCCAAAGTAAAACAACTAGAACCCTACAGAATTGGAGGCTTGGATCTTTATTCCACTACCCTGTGGCATCTTCAGAATGAAGTGGCTTTGTCAGCTTTAGCTCAAGACTTAGTAGAAACTGACCGTACATCCCCGCAGGCTTGGTGCGCCACTGGTAACTGTTTTAGTTTACAAAAGGAACACGATACAGCCATTAAGTTCTTTCAGCGTGCTGTACAAGTGAATCCTTCCTTCACGTACGCCTACACGCTGCTCGGTCATGAGTATGTACTCACAGAAGAACTCGATCGAGCCATGTCTTGCTTCCGCCAGGCTGTCAGAACAGATTCACGCCATTACAATGCCTGGTATGGTATTGGCATGATTTACTACAAACAAGAGAAGTTCAACTTGGCTGAAATCCACTTTAGGAAAGCTCTGTCGATTAACCCGTCCAGTTCTGTCTTATACTGTCATGTTGGTGTGGTACAACACGCAATGAAGAAATCTGAAGCCGCCCTCGTCACCATCAACAAAGCTATGACTATTGACCCAAAGAATCCGCTCTGCAAGTTTCATCGCGCCTCAATCTTATTTTCAATGGATAAACACCAGGAAGCACTTGAAGAACTGGAGGAATTGAAGAAAATTGTACCACGAGAAGCTCTTGTGTACTTTTTAATCAGCAAGGTCTACAGAAAACTGGGACAAAACCACCTAGCACAGATGAACTTCTCTTGGGCGATCGATTTGGACCCCAAAGGCGCGAACAACCAAATCAAAGAAGCCATTAACAAGCGATATGTCACAGATGATGACGACAACACCATGGGCCTCGACACCGCTGACACCATGGACCAATCTGTGGGCGTTGATGATATTTCGGACGAGGAGGGAGATTAA

Transcript

ENSOFVT00000014152

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4V8A2	Cell division cycle protein 27 homolog OS=Rattus norvegicus OX=10116 GN=Cdc27 PE=2 SV=1
P30260	Cell division cycle protein 27 homolog OS=Homo sapiens OX=9606 GN=CDC27 PE=1 SV=2
A7Z061	Cell division cycle protein 27 homolog OS=Bos taurus OX=9913 GN=CDC27 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004282 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181 all species →	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF12895 all species →	ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	Repeat	Interproscan
PF00515 all species →	TPR_1	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12558 all species →	CELL DIVISION CYCLE 16,23,27	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005680 all species →	Cellular Component	anaphase-promoting complex	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007091 all species →	Biological Process	metaphase/anaphase transition of mitotic cell cycle	Interproscan
GO:0016567 all species →	Biological Process	protein ubiquitination	Interproscan
GO:0031145 all species →	Biological Process	anaphase-promoting complex-dependent catabolic process	Interproscan
GO:0051301 all species →	Biological Process	cell division	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03350	APC3, CDC27; anaphase-promoting complex subunit 3	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.