Detailed information of ENSOFVP00000014247.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020613039.1, la-related protein 4B-like isoform X3 [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8BWW4La-related protein 4 OS=Mus musculus OX=10090 GN=Larp4 PE=1 SV=2
Q71RC2La-related protein 4 OS=Homo sapiens OX=9606 GN=LARP4 PE=1 SV=3
Q9I7T7La-related protein Larp4B OS=Drosophila melanogaster OX=7227 GN=Larp4B PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006587 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05383
all species →
LaLa domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036388
all species →
Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR006630
all species →
DomainLa-type HTH domainInterproscan
IPR036390
all species →
Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR045180
all species →
FamilyLa domain containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22792
all species →
LUPUS LA PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0003730
all species →
Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0010494
all species →
Cellular Componentcytoplasmic stress granuleInterproscan
GO:0045727
all species →
Biological Processpositive regulation of translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOFVP00000014247.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP