Gene detail

Detailed information of ENSOFVP00000014422.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_027042566.1, leupaxin-like [Pocillopora damicornis]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000015536

CGTAAACGTATTCGTCTGAGTTTAAGACCGTAGTAGTCCGTTAGTTTGATAATTTAACAAGAACGGTGAATTTGCAAGTGGATATCTGAAATTGTCCTGCAAGTTGCCATGGAAGATTTGGATGCGTTGCTGGCAGATCTTCAAGCGACAAGTCCGACTGTTTCTACGTCGCCTACAGAACCAAGAGGAAGACAAACGGCAAATGGACGAGACTCCCCCGATATTCCACCACCTCTACCCCCGCCTCCAGCATTCGAAGCCTTCGAACTCCAAGCCTTCGATCCTCCAGGATCCCACTCTAGAGACGATGGCTTGTTCCCTCCACCTGCCCCTTCATCGAGTTTGGGCCAGAACCTCTCCGAGTTAGACAGTTTATTGGAAAATCTAAGTAACCCTCTACCTTACTCTTCGGATCCACCAGCCAAACGAATAAGTGCAGAATCACCTCGTGGTAGTCAGTCATCACCATCTCCAAAGGCGGTAGTAAATGGTCGACCACCTAGCTATAAGGTGCCTGTAACAGCAGCTGCTTATGATATTAGACCAGcTGATTCACGTTATGGAGAAAGAAATGGACCCGAGAGCCCCAAAGGTCAGGTGACCTCAGCTCAAGTTGTTTCTCCCATTCCCTTGCGTGGTCAACTGCAGCAGACCAGAGATTTTGACAATAGGCAGTCACGTACTGCATCAACAGCAACCAAGGAGCTTGATGACTTGATGGCGTCTCTATCAGATTTTAAAGTTAATGTTACAACAGCACCTGCTCCATCACAAGCGAGACTCAGTGGAGATTATGCAAAACCTAACAAGACTAAACCCTCAAGTACTCCTGCTTCTGTTGGTAAAGTCAGTCAGCTAGACTCTATGTTGGGCTCACTTCAGACAGACATGACTAGACAAGGAGTCAGCACAACAAAGAAAGGAGAGTGTGCGGCATGTAACAAACCAATCATCGGCCAGGTTTGCACTGCATTGGGTCGCACATGGCATCCTGAGCATTTCACTTGTGTTACTTGTGAAGTGCCGTTAGGTGCTACTAATTTCTTTGAACGAGATGGAAGGCCTTTCTGCGAGAGAGATTACCATGAGCAGTTTGCGCCAAGATGTGCTTACTGTAGTGGACCCATCTTAGATTCTTGTGTAACAGCCCTAGACCAGACATGGCATCCAGAACATTTTGTTTGTGCAAGTTGTGGTCAGCCATTTGGTGAGACTGGCTTTCATGAAAGAGATGGCAAGCCTTTTTGCCGTGAAGATTACTACGCCATGTTTGCTCCCCGATGTGGAGGGTGTGGTGAGCCAATAATGGATAGCTACATCTCTGCTCTTAGTGCTCACTGGCATGCAGAATGCTTTGTGTGCTCGGAATGTCATCAAGCTTTTCCAGGAGGAAGCTTCTTTGAGCATGATGGCCGACCATATTGCGAGATGCACTATCACGCCAGGCGAGGTACACTGTGCTACAGCTGTCAAAAGCCCATCACAGGCCGTTGTATCACTGCCATGCACCGTAAATTTCACCCAGAGCACTTTGTGTGTGCATTCTGCCTCAAGCAACTTAACAAAGGTACCTTCAAGGAACAGAACGACAAGCCCTACTGCCATCCATGTTTTATAAAGCTATTTGGGTAGATAAAAGATTACCTTTGTCCTTGGAGAATTCTAGAGTTACTcaagattttgaaatattaataGGTTGCAGCATTTTCACTTGACCAGAAAAGGCGGCCGTTTCTTTCACTTCTTTGTCCTACTGTGGTTTGGGGTTGAAAACCtggctacatgtacattttactTTCTGTTTGAACTTGGTAAAATACTCATTGTGAGCACTAAACCAAAATCTAATTTTTGACtcgttaataattcatcaagtttaagcAAAGGAAATCACTGCTGTGTTTGGAtctctgatcttaattagcatagattttcatgattttattttcctaatTTCTCCGTTTAAGTTTTAGtagagaagatatatcaaacatggACCATGTTTAACACCATTTCCAAACTCCctgaagtttgtcaaaaatacacCTCTACATGTCATATTTTCAACTGTTCCTGGTGTTTAGAAATGATGTCAAACAGAGTTTTATGTGTTTGATTCCTTGAAGGTTGTTTCTATGTGATGTGCTGATGCTGTCTGAAAATATAACATATCATTAAATAGTCAAATTTATGGTATGTACCTAGGAACATTTTCTGCTCAGGAATCTGAGAACATTGTTTACCATATTCCAAACCCAGATGTCAGCATGAACATATTTCCTTGTCAGTCTCTATGCTATGCATGTCTTTTAGTATCAATTGGGAGATCTGAATTCAAAATCATTACAAGTTACCATTGGTGATCAGTTCTCTGGTTCTTATAAGATTGTATTCTCATATTTGCATCGATATTGtttgtgaaaaacatttttaaaccctgcccaaacgatcacaacattTCAACCCAACATATCACAACACTGTTGGGCACAATAATATTATGTTACATGCGTTTGGCCAGCCTGTAGTGTTGTGACGTGCtgtgacatgttgggtgttgttggctcaaactTAAgcgttttcaaacttgagccagctTGTCGCAACACATTGCAACAGGGTGGTGCAatg

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8VI36	Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=1
P49024	Paxillin OS=Gallus gallus OX=9031 GN=PXN PE=1 SV=1
P49023	Paxillin OS=Homo sapiens OX=9606 GN=PXN PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004948 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00412 all species →	LIM	LIM domain	Domain	Interproscan
PF03535 all species →	Paxillin	Paxillin family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001781 all species →	Domain	Zinc finger, LIM-type	Interproscan
IPR050604 all species →	Family	PDZ and LIM domain-containing	Interproscan
IPR001904 all species →	Domain	Paxillin, Lim domain 4	Interproscan
IPR047075 all species →	Domain	Paxillin/TGFB1I1, LIM domain 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24214 all species →	PDZ AND LIM DOMAIN PROTEIN ZASP	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001725 all species →	Cellular Component	stress fiber	Interproscan
GO:0003779 all species →	Molecular Function	actin binding	Interproscan
GO:0005912 all species →	Cellular Component	adherens junction	Interproscan
GO:0030036 all species →	Biological Process	actin cytoskeleton organization	Interproscan
GO:0031941 all species →	Cellular Component	filamentous actin	Interproscan
GO:0051371 all species →	Molecular Function	muscle alpha-actinin binding	Interproscan
GO:0061061 all species →	Biological Process	muscle structure development	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05760	PXN; paxillin	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.