Gene detail

Detailed information of ENSOFVP00000015281.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020617216.1, uncharacterized protein LOC110055188 [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

ENSOFVT00000016468

ATGCCAATTCGTCGAGGACGATTCGCGCCGCAGAACACATTTCTTGAAACCATCGCACAAAAATTCGACCGAGGAAACAGTAACTTCGTCCTTGGCGGCGCTCAGGAAAAGAACAATTACCCCATAGTGTACTGCAGTGATGGCTTCTGCGAGCTCACTGGTTTTTCTCGGAGCGAGCTCATGAGGCGAAGCTGTGGTTGTAACTTTTTGTACGGACTGGAGACAAATCAAGATGACAAAACGAGCATTCAAAAGGCTCTGAAAGCGCAAGTGGAACTCAAGAAAGAAATAATGTTCTACAAAAAGAATGGGTCGCCATTTTGGTGCTTATTAGACATTGTTccaattaagaacgaaaaaggCAATGTGGTACTATTCCTTGCTTCACACAAAGACATTACCAAGCGAAAAATAAGTGGAGAGTTCTCTGAACAGGATATAagtacagggggggggggggggggggctccatCCAAGAGTATAAATGGATCCCGTTCAAGGAAATTCAGCAGAGATGTTCTTCTTCACCTATCAAGACAATACCAACAGAGTACAAGTCCGGCAAGCAAAACCAACCCACGGAGACCCATCAAGAGAGCGCGATCTTTTTCTTTCACTTCCGAGCGACTACCACAGTACAAGCGAGAATCAGACAAGAAATCCAAGTTCCTTTTCTTGCACTACAGCGCCACCAAAGGATTTTGGGATTGGTGGATTCTCATCATGACGACTTACATTGCCATCATGGTCCCTTATAATGTGGCCTTCAGGAGAAATGACCGGAAAAGGGACCTGATCATATTCGACATGGTGATCGAATTGTTCTTCATAATGGACATCGTGGTGCATTTTAGAACTTCTTTTGTGGATTTAAGTGGAAGGATTATTTATGACCAGAAAAAGATTGCCATTCATTACCTGAAGGGATGGTTTATTTTAGACTTTCTGGCCGCGCTACCATTTGAAGCATTGTATTTTGTTAATCATACTTGGGGCTTTCTAATTCAACTTCTGAAATGTGGACGACTCCTTCGCCTGTTCCGTGTGGTCCGTAAGTTGCATCGCTATACAGAATACAGCGCCATACTCCTCACTCTTCTAATGATTGCGTTCGCAATGATGGCTCATTGGCTCGCTTGCATCTGGTACGTGATTGGCTTATCCGAAGTGTCAGACAATTCGACAGTCAGCTGGCTTTATGCCCTTGGAGAAGCCATCAACAAACCGTACGTTAACTTTACAATAGGGACTGGACCCGATGAAGGGTCTGCTTACGTCACTGCGCTATATTTCACGCTGACCAGTATGACCACGGTCGGATTTGGTAATGTGGCTGCAAATACAAATGGAGAAAAAGTGTTCGCTGTAGTTACTATGTTGATAGGAGCTCTGATGCATGCTGCCATATTTGGTAATGTAGCCGCCATTATCCAGAAGCTGTACGCCAATCGAGTTCGGTACCATTCCCGCGCGAATGAAATCAAACAATTTATCCGGGTACACAGAATTGACCAGGATTTAGCAAATAGACTTGAAGATTATTTTCACACTACGTGGTCCCTTTCCGGCGGGGTCGACACTAGCGAGATTCTCACTACATTTCCGGAAGAACTTCAGTCTGACGTATGCATGCATCTTTACAAAGGACTGCTGGAGCTCAACCCTTTTAACCAGGCCCCGCGCGGTTGTATCAAAATGCTCTCGCTTCAGGTCCGCACGGTTTACATTGGACCTGGTGAGGTACTACTGACGcaaaatgacgtcatcaacGCTCTTTATTACATTGCTAGTGGATCCATGGAAGTTCTTCAAGGAGAATCTGTCGCCGCCATTCTTGGTAAAGGAGATCTTTTTGGAGAGGACATCTCACGCAAGACTCCTGCAAAGCGTGCAAACGGTGACGTCAGAGCCCTGACATATTGTGACGTTTATTACATAACACGTGAACGCTTACAGAACGTTCTCCACTTTTACCAGGACTTTGCGTTCAAGTTCTCCGAGAACCTTGAACTTACGTATGATCTGGGAGCGAGTGAGCGGGATATCTGGCGGAGAGGAGGCTTGGACTCGATATCAGAAGACGAGGAAGAAGAAGACGAGGGAACGGAAACCAACGCTCTTGATGGCGTCTTCAATCACGTGAACCACGCTAACAAATCAAACCATATATATGGCAACTCGACCCGGTTTAATAGGAGGCCTGGGCACAAGCTGAACCTGTATAGAAAACCAAATCATTTTAAGACCGCAGAATCGTGGAGTGGACTCAAGAGAAATAATACAACGGACTGGAGGAATCGAACTAATGACGTTGAAAAACAACCATTGTGTGCTTTACCTGCGGAAGAAAACACTTCGGTACAGCAGTCTCCACGATCGTTTATTCGTCAGCTTGCAGTCGAGGTAAACGCAGGCTCTAACAACGATGCCCTGGATTCGTCACCGAAGGAAAACTCCTCTCCTAGTGAACCTTTTCCTGATCCAAGCCTGGAGTGGGATCAGGAAAACTTCGCGTTGAAAAACGACTCAAATTCTTTCCATGATGAACTAGACGGTGAAAGTTTTGAAATGACAAACATGAATTTGGGCATTGGAGTATCTGCGATGGATGACATTGCGGAGGAAAAAGAACATGACGAGCGACACAAGCTCCTCACAAACCAAGAGTCCTCTGACGATGAATCTACGGATAATAATTCGCAGACTAGTGACTCGCCAGAGTTGGCAAAAAGATGCACCAGTGATTTTTCCAAGCATCTTTACTTAGCGTGCGACGAAAATGATGTAGACAGCCCGGTTTCCTACGCGAATGGAGATCTTAGTGCTATCCCTGAGACGGAAAACATAGACTATTTGGCGGCTGGCACGGAAACGGAGGATGCTACAAGAAGTTTAGATTACAATGTTCGAGACACATCAAGAGATTTACACGATCACGTTGACGACACTCTAAAGGATTTATATAACGGCGACGCTCTCGGGAGTTTGTATAGGAGCTTTACAGATAGTTTCAAACTTAGCGGACCTACCACTCCATATGGAAGTCCCAAAGGAATTCCTCCATCTTCTAATTCTGGAAGCCCCAGGGACTACCGACAAAATTCCGCAGGAAGTTCCCAAAAGTCAGGTCGGTTGCTTAGCCTTGAAAAGCCCGATAGTCCACGAAATAAATTTGGGAGCATCTTTTCCGAGATGAGGGCTTCAAGTCCCTCTCCTGGGAGTCTTAAAGAGGGACTCTCTCAGGAAGAACGCGCAAGAAAAGGAGGTTTAAGACGTACATTAACTGAGTTTAATTCGCCAACTAACTCTTGCGGCTCTTTAAACGAGAAACCAGTAGCATCCGCCCGGAGGAGGAAGGTTTCCGGGGCTATACAACCTCCCACCATATTTGCACCTCTTGTCGCGAACGTGAACAATCCTTATAAGGATTTTGTACCTCCTGTGCGCGAGTCCCCGATCACGTGTGACTGTGAGCCAGAGGAGGAGATACCGTGCGAGGGTCTGGGACTGACTTCAAACGAATGTGACATTTGTTACGAAGGGGGTAACCACAGTTATAAATCAGACAATTCGGAGGACACAAAAGAGGACTTCTACAAAATCGCCAAAGACTTTATCACTGACAGACAACTGCATTGTTCGAGTGGTAGAAGCAGTGGAGAACAGCCCGCCAAAAATGATGTGTTCTCTTCACGAACGACTTTAACATCCGAGACGTCGTTTGACAAGTGGGAACCTCGAAGCGATCTTTCTCAGAAAATTGACGATTCATCGTTCGAGTGTAACTCCGTTAAAGAGCGTACCGACTGCTTTGAGCGACCCCGGTCATCATACTCAAATCTTCACCAACGACCCAGCCTTTCTGGGGCTTATTCGACGCAATGCATCGAACAGGAAGAAATTCCAGAGAGCGACGAGCTGTTTCGCCCAATGCGATCTAGTTTCTCAGAGCCTCACCTCAGTATAAGAATCTCCGCGCTCGATGGAATCACAGAGCACAGATTGTCCGAAGAAGATGTAGAACAAGCCAGTTTAGCCAGCCGAGACACAACGACTCGAGATCTCGAGGATATCTTCAAAGATGTCTCCAGCACCAAAGAAGCCATAGAAAAATTGGAACTGATTTTAAGCTCACCAGAGCCAGATATCTATACAGATCTCGCGGACACGAAAGAGACAGTTCAGAAACTAGACAAACAGGTTTTAAACCTGAATAAAGACGTTGCGTCACTAAGCAATGACGTTAAGATTGTTTTGGAGTTGTTGAAAAGTCTGAAAAATGGCCAAGTGGTTGTACATGGATAA

Transcript

ENSOFVT00000016468

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P59111	Voltage-gated delayed rectifier potassium channel KCNH8 OS=Mus musculus OX=10090 GN=Kcnh8 PE=2 SV=2
Q9QWS8	Voltage-gated delayed rectifier potassium channel KCNH8 OS=Rattus norvegicus OX=10116 GN=Kcnh8 PE=2 SV=2
Q96L42	Voltage-gated delayed rectifier potassium channel KCNH8 OS=Homo sapiens OX=9606 GN=KCNH8 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004291 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00027 all species →	cNMP_binding	Cyclic nucleotide-binding domain	Domain	Interproscan
PF13426 all species →	PAS_9	PAS domain	Domain	Interproscan
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001610 all species →	Repeat	PAC motif	Interproscan
IPR000595 all species →	Domain	Cyclic nucleotide-binding domain	Interproscan
IPR000014 all species →	Domain	PAS domain	Interproscan
IPR014710 all species →	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan
IPR035965 all species →	Homologous_superfamily	PAS domain superfamily	Interproscan
IPR005821 all species →	Domain	Ion transport domain	Interproscan
IPR003950 all species →	Family	Potassium channel, voltage-dependent, ELK	Interproscan
IPR003938 all species →	Family	Potassium channel, voltage-dependent, EAG/ELK/ERG	Interproscan
IPR050818 all species →	Family	Voltage-gated potassium channel family H	Interproscan
IPR018490 all species →	Homologous_superfamily	Cyclic nucleotide-binding domain superfamily	Interproscan
IPR000700 all species →	Domain	PAS-associated, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10217 all species →	VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005249 all species →	Molecular Function	voltage-gated potassium channel activity	Interproscan
GO:0006813 all species →	Biological Process	potassium ion transport	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0042391 all species →	Biological Process	regulation of membrane potential	Interproscan
GO:0071805 all species →	Biological Process	potassium ion transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04911	KCNH8, KV12.1; potassium voltage-gated channel Eag-related subfamily H member 8	-	Ion channels	ko04040	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.