Gene detail

Detailed information of ENSOFVP00000016305.1 in Cyphastrea salae

Genomic Location: :...
NR annotation: XP_020631926.1, LOW QUALITY PROTEIN: S phase cyclin A-associated protein in the endoplasmic reticulum-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSOFVT00000017567

ATGTTAGTATTAAAACTTCTTGTACATAATCATACCTTTGTTTTGATTAGAATTCTTTTTATCTATTTCCATGATCACGTTCGTAAACTTGTTGAACAGGAAGGAAGAGCTGCCAGGAACTTGGTTACATGGTCTGTTCCTGTCACAGATCCTAATCAGGATGAAAAGGGAAAGAAGTCTAAACCAAGGATGGTAAACAGAAAACGCACCTCTACACCAGAAAAATCAGGCTCATCCGAGAGGGAGGCTTCTCCTGCACAGAAAGGAGGAACTAAATCTCCAGGAAGATCTCGTTCAGGGAGCAGGAAATTGTCTGGTTCTTTCTCAGGGAAGAAAAATGACCTGAGAGCTCGCTACTGGAGCTACTTGTTTGACAACTTGAAAAGGGCTGTTGATGAAATTTATGGAACTTGTGAGGCTGATGAGAGTACTGTAGAATGCCAGGAGGTAATTATGATGCTGGATCAGTGTCGTAGAGACTTCAGTGCTTTGATTGACAGAATAAATGTGCAGGATGCATTTGAAAAAGCTGATTATAAGGACAGGCCAACCTCTCTAGCATGGGAAGTGAGAAAATCTTCTCCTGGGAAGACACTGTTTTCTAGTGCTAATGCTTTACAGACATCACTTGATAGAAACCCAACCAGTCCTGTTCGCTCGTTAGACTTCAATTCACAATCTGTTCTGCCTTTAAGTCAGTCACTTAATCAATCAGGAAATTTAGTACCAGTGCAATCTTGGGCTGATAAAGTGCGAGGGACCACAGCTAGTGTAAATTCTACCAGTGCTCCATCAAAAACTATTGACCTGAAGGGACAAGAACATTACAATGCAATTCCTGGATTAAGACGTTTGTCTGGAAATTTAGAAGACTGCGTTGTTCAAGATGTgaatgatgatggtgatgatgaaggGTGGGAGACTGTTCATCGTGGAAGAAAGATGCATGGCAATCATGCAAagaaagcaaataaaaattcgGAGAAACTTTCAAATGGAAAAAGGGAAACAGAATCAAATGATTTGAGGATGCAGAGGGTTATAAATGGTACAGGTAGTAATGGTGATGTTGGAAATCATATCGAAGATAAAGAATTTTGTACAGAACCTTACGTAAGTACAGGTGAAGCCCCTGAGAAGTTATTAGAAATTGCGCATGAGAATGACACTCCAGCTCTTTTTCTTGATGGCGATGATGAACAGGACACGTTATCAGACATTGAACATGACAAGGCACTGTcagcggcaatggaggaagaaGAGAGTTTGTCAAGACAGATAGAGGAATGGCACAACCAAACAATTGCATCTGTTATTGAACACGAGGAACGTTTAACAAAAGAGATCGCAGAAGAAGAAGAATTGGTAACAGCAATAAATGGTGAAAGTCAGAGTCAGACCTCTGATATTGAACAAGAGGAAGATATTGAAAATGTCAATGATGTGGAGAACTCTTTGAATGGCAGTGTTATGACAAACGGAGACAGTAATTCACTGATGAACTCAGGAACCACACCGACATGGGAAGAGATGATTGCAAAGTATGATGCCGACCATTCTGCTGATATGGAGAGTAGTTGGGGTGATCTGGTGGAACAAGCAGAGAGACCTCCTGGGCGGGCTGTTCATCTTCATCAGAGGTTGTCATCGCCTTCAAGGAAAAGACCATTGGAAGAAGTTATTCGAATTCATGAAGAAAAACAGTTGAAAGCACAGCAGCAACGAGAACGAATGTTGGAAGAAAGGTTACAAAGTCTTCAGATGCTTTCTGAAAAGGTCCAGAAAGCTCGCGAACTAAAGGATGAGCTGATTCAACAACGCCAACAGCATCTTGATGAGAAGCAAAGAAGAGCAGAACAGCAGAGACTGTCAGTGCTTCAAGAGAAAGTCCGTAAAGCACAAGAAGAAGAAGCCAAGGTTAACGAAATAGCTTTCATTAATACATTGGAAGCACAGAACAAGAAGATTGAAGTTCTCACAAGGCATCAGGGACATGAAGCAAGGCTACAAGACATTCAGGAAGagaggcaaagaaaaaaagaggagCAACAAGCAAAAGAGGCCGCTGCACAGGAGAGGCGTCGGCAATTAGAGGCTGAAAGACTGGCGAGACTTGAAGAGATGCAGCTTAAAAAGCTTGAACAGGAAGCTAAATACAAAAGGGAGAAACACGAAAGAGAGAAGGCCAGAGAAGAAGCGGCAAAAGAAAAAGCCAGaGAGAGGGAAATGCGCATCGCTGCTCGTAACGAAGCCCTACAGACAGCAACAGAACAGCTACAACTTAAAATCCAACAGAAGCAAGCTGAAACGACAAGACGCCATGAGCAAGTGCTGGAACATGTGAAGGAAAAGGCTGCTGGTGTGTCACGCCATTCCACCCAAGACGAGGTCCCTGCTGTCACGCCATACGACAAGAAAAAGATGTGCTCTTTGTGTAACGTTGAGATTGTGTCCGAAGTTTACCTGTTGAGTCATTTGCGAGGCAAGAAACATCAACAAGCTTTGTCTGAAATACCAGCAGCGAAAGGAACTGTAGAAGACAAGGATATGATTTCGCTTCAGTACATCAAAGAAATGCCGTCAGACAAGGCAGACCAGACAGAAAAGGCGGATCAAGAGCGGCAGAAAGCTCTCAGAAAGAGAGCTAAAAAACTAAGAACTAGAATGGCAGCCAAAGGACGAGAGTACGAAAGTAATTTGTCTAATTTATCATCACAAAGACAAGAATCTGCCAAAAAGCCGAGGCTTCAGAAAATTATTAAAGATATCAATCGTCAGCTGCAGTCACAAGGGACTGGACCCTGGCCAGCGAATCGTGTTGGATCACTTGAAAGATCTTTGGGAGAATTAAGCAGAATTTTGGAATCAAAGGTAACCGCCGACCAGGTGACATTTTGTAATCTCGGAGGATTGACAGCCCTGACCAGGGTCCTGTTAGTACCTGATATTGCCAGCGACAAGCCTCCGGTAAAACCAATCATTCCAAACAAAGCTCTTTGTAGCGTCGCCAATGTGTTGGCTCTTGCTTGTGGTGATTGTTTGGATAACTGTCGTTACATGGTCTGCACAAACAAACTCAGTTCAGTTGTGGATCTTCTTGTTTACCAGATAAAGGGTGTTCCTCAGTCCCATGGCACGTCAAAGAAAGGAGCGGAAAAGGAGACTGGGAGCAGTGCTACAAACCAGTCGTTACCAGATCCCTTGGCTACAGCGCTGTTGAAGGTCCTAGCCACAGTGCTGCAGTGCTTTGCGACAGCTTCGCCGGAAGAGAAAGAAGTAGCGACCCTCGTACAAAGAATGGTGGATTTGATCGGCTATGTGGTATGTTCTGGAGTGGTTGATGACATCAGAAGTTTTTTCAGTACAATTCACGGTCCCTTAAATGAAGATCCCGCTGCAGTGAACTACGCTCAGGCCTGTTTGGCCCTTATATCCGCAACTGCTCAATATCTTGGTTCACGGTTGAGTAACATTTTTGAAACAAGGAAAGAAGACCTTTCTCAATTTGTTGTGACATTTCAACAGACCGAGCTTGTTGAAATCGTATCGTTTCTGTACGCCATCCTAATGAATGTTGGCAATGCGCAGTCCTCGTCGAGTCCAACACTTCCAGAGGTAACCATAAACTTGGTGACAGAGGCGCTGTGTATGTTGAACTTCATGGGAACTGTAGATCTGAAGGTGTTGCAGGCTTGTTTAGGAGCAGAAGGTGTTTCGCTGGAATTTCGACACATTATCAGCCATCTTTTGTGtgTTTGTAGTGAAGGGAGAAATGAGGATCTCCTACATGAAGTGATATTAATCGTTGGATATTTCACCGTTTTGAACAATGATAACCAGGTGTTTGTTCAGACTGGGAGACCTCCTACCTTACTGCAGCATCTATGCTCTCTTCCTTTCCAGTATTTCAGCGATCCAAGACTTCGGAATGTTTTGTTTCCAACACTCATTGCCGCGTGttttgaaaatgaagaaaacaagaaaataattgaaCAGGAAGTGAGCTGTGCGTTGCTTGAAAACTATATCGAGGAGCAAATACTAGATCTTCATCATGATCACTTGTTACCCTCTCAAAGCGGAAGACGGTCAGATGGCGAAGTGTCCCAGCGTTTTGCCCTCGTAAACAGGTTTCCATCTTCGAAGTGGGAAGATGCAAGACGTTTTTTGTTAGGATCTTGA

Transcript

ENSOFVT00000017567

Protein

Uniprot

Uniprot term	Description
Q9BY12	S phase cyclin A-associated protein in the endoplasmic reticulum OS=Homo sapiens OX=9606 GN=SCAPER PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12874	zf-met	Zinc-finger of C2H2 type	Domain	Interproscan
PF16501	SCAPER_N	S phase cyclin A-associated protein in the endoplasmic reticulum	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003604	Domain	Matrin/U1-C-like, C2H2-type zinc finger	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR032446	Domain	S phase cyclin A-associated protein in the endoplasmic reticulum, N-terminal	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31434	S PHASE CYCLIN A-ASSOCIATED PROTEIN IN THE ENDOPLASMIC RETICULUM	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24869	SCAPER; S phase cyclin A-associated protein in the endoplasmic reticulum	-	Cilium and associated proteins	ko03037	deepkoala