Gene detail

Detailed information of ENSOFVP00000017188.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: CAH3033992.1, unnamed protein product, partial [Pocillopora meandrina]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

ENSOFVT00000018593

GATTTTCACGCCAACGTAAGGGAGGACATCCCAAGAAAGAGAGTTCTTGTGGAAGACAAGAGGCAAAAAGGAGTAGTTCTTGAAAGATGGGATGGAATCGACGGTTATTTGACCCGGAAACTTCTGGAAGATCCTCGTTTTCCCACCATGCCAACATATCATTCTTACACAGCAACATTCACCGAGCCAGTGAACTGGGGAGACAATTATGGATCACGGATCAAAGGTTACTTTGTGCCACAACAGAGCGGACCTCATGTTTTCTTTATAGAGAGCGACAACGAAGGCCAACTTTTCCTCAGTACAACAGACAACCCAGATCAGAAAATATTGATATGTCGAGTTGGCAAAGATCACGAGTCCCTTCCTTTGCAATTTTCAAAgtaTCCTGAGCAAGAATCTTACCCAATAAACTTAAAAAAGGACTCCTATTACTACATTGAAGCTCTTCACAAAGAACAGTATGGCAACGACTCCTTGGCGGTGGCTGTAAAAACGCCTGATAATAAATTTTACGCCCCAATACCTTCTAATTTTTTGTGGACAATGACACCTCCTAAACCTCAAGCAAACGAAACTGTTTCTTCGTTCTACCTTGTGAAGATAGCAGCTAAAGCTGGAGCTAAGGCGGGTGCATCCCTTGGTATAAATGAAGCACAAAAGTCCGGCGCCAGGGCGGGTGCTATGGCAGGTGCTGAAGCGGGCGAGAAGGCTGGGGCTGAGGCTGGTGCCGAAGCAGCAACTAAAGCAGCAACTGAAGTAGCCACTAAAGCACTAAAAGAAGCCCTGGCAAAACTTGGCACATTTAACAAGCCGACGTTTTACATATATACAGGAAATGGAAGTGTCATACCAATGCAGCCAGGACTCACATCTCAAACTGGGGGACAAGTAGTTACATCTGGGAAAAATGCAACGGGCCCCACTGTGACGAACACAAGTGGCGTGGAAGGTGGTCAAACTGTTCAAACTGGTCAAACGGGTCAAACGGGTCAGATAGGAGGAGAGGCTTCTATTAATATAACAACTCAAGTACAAGGTGGGGTGCACGGAGCACCGGGTCAAGCAGCTCATCCAGGGATTTACCACGGGGCATTTGTATACAACCGCGCAGTTCCCTATTATAttccaccagctcagtacaatgGTCATATCATAGCCAGACATAGAGAGTTTTTGGACCCGCGAGGACTCTCAAGAGTTCTTGTTAATGGTGCATTGTACGTGGTGTATTCTTTTGATGTTCCTGCTAGTCAGAATCCTACGTATAATCTCTGTTGGCGAATAACCAATGGGAGACTAGAGCTGACCCAAAGCTGTCAGGCTTTTGCCATCAAGATCCCAGGGTTTCTCAAAGGAACCGGCGAACATCAAACTATATCATTTGAGTCGGTTTGTCATCCCGGTCACTATGTTCGGCAAAAGAACTACAGATTTGTCTTGGGGATGAAAGGAGACACAAAGTTTGATTATGATGCGAGTGCAGCCTTTTTCCAGGTCTTTTCCTTGCCAGGAGCATTTCAATTCAGCCTTATGAGAAAAGGCTGGTACATCTGCAGAAGTATAAATAAAGACTATCACCGAACAGACATAGTCACAGACTACAACATGGCATCCGATACATGGTTAAGACGTTGTTCGTTCGCCTTAAGACCTCTGGCTGCAAACGAGAATCCGCTAATGAACTGTTTTGACACCGCACCATCTATCATGCCTCCAGGAATACCGTCAATTAGTTCCACAATCTCAACACCATCACATGCAAATAAAACAACACCGACCACGCGTCCAACTACAGTGCCAACTACACACcacaaagaagaagGTCCCTGTCTCAACCTCACCTTTTGGAACAATGCTGGTGTGCCCTTCATTCTCTATTCTAGTCTCAAACCCGAAGGTTATTTGGTCACAGGACCAAAGTTGCATCTTCATTACGTCATTCGTGACGGTCAAGTTTTAGGTTTGCAAAGAATTGAGAGAAGACGACGAGGAAACGACGCTGAGGTTCTATCTGAAGTAATGGATGAACTGGACAATACTCAGCAGATTTATCTGGACAAGCCCAAACTAGCAGCCAGACAGCTTGTAGCGTTCTGGGCCAAGGATCCAAATGGGAAGCGAGAAATTCTTTTGGACGGAAAGGACCTAGTGTACGCAATACCTGGCCTTCAATGCCATCATTATATACAAGTGACCGTCACGTCCAGGCCGAAATCtaGTCCTCTAACGACGAAACCGACAACACAGACAGCAACACCGAAACcttcaccaccaccaccacctgtAACCCTACCACCTTCTCCGTCACCAGCCCCACCGCTAGCCCCACCGCCACCGTCTCCTCCTTCAATAAAGCCGACAAAACCACCACCTCCTCCTTCCCCTCCTCCGCCAACCTCGCCACCACCCTCTATCACGACAACGAAGCCTCCTGTTACTCTTCCGCCATGTACTCCTGGAGTTCCAGGGACAACTTTGTCGACCATTCGCCCGTGTTCCCCAACAACACCTCCTACCACTAAACCACCCACTACCATTCTTCCACCATGCCCACCTTCCCGTGGCCCCCTACCTCCTGGCTCTCCTACGTGTAAGCCTAAACCTGGCCCTCCTGTTACTCCCCCATGTTTTCCAGGATCTCCACCACCATCCCCACCTCCATGTGTGTCACCCCCGTCACCAAAAAATACGCCTCCACCGGTTGTATCGGTTACTTTACCAACACTTCCTCCAATAACAACGCTTCCTACGCTTACTGGCTGCATGCCAACCCATGGAGGGACTTCGAAAGGCGCTTGTTGCATTTTCCCCTTCATATATCAAGGAAACCCGCAACACCGCTGTACTAGAGCCGAACTAGGCTATCGCTGGTGCGCAACAAGTGCTAATTATGACTCTGATAAGCAATGGGGATTCTGTTCCGGTTGTTTTTTGTGCTACGGCGGCAATTCAAATGGCAACTGCTGCCATTTTCCATTCATATATGGCGGTAAAATGTACACGACTTGTACAACTCAAGACGAAACCAGGCCCTGGTGTGCCACTACTTACAACTTTGACGTGGATAAGCAATGGGGTTACTGTGGAGGTGATGCTCCTGGCTCGGTGCCTCAACCCAACATTGCCTTTGCACCATGTCCCTCTGCCTGCGACGGTAAGTGTGTCGACACTTGTCCTGACTACTGCTGTGTTAAAGGCGCAATAAGTAAAACAAGTGTGCAAAAACCAACTATTTCTCTTTATTTTCAACAGGCTAAGCCAGTTCCTGAATTGCAGCAGACCTCTCCGTCCTGTCCAGCTCTCTGTGCCAGGGTCTGCTACCCAGACTGCCCTGTACGCTGTTGTAATGCTCCTCCTCCCTCCCTCTACGTCCCCAGTCCACCTCCTGCTCCAACGTACTGCCCACAGATCTGCTACAGCACGTGTGTTAGTTCCTGTCCAGCGGACTGTTGTACAAGCACGCAGCGAGGAGTTAACCGGGACACACTATCATACTCTGTTAGCCTTCCGTGTCCGACTAACTGCTATCATAGTTGCAGTGCTGACTGCCCTCGTCAATGCTGCAAGGCAGCGAGTAAAGGATACAGAACTATGACACAACCTGTGATGAACAACCGAATTACTGACAATTACTTGAGGATGCCTGGGGCGCGAACGGTTCCTTTTATGGATTTGCATCCGCCTTCATTATCGAACATTTTGATCCGCTCTAACTTACCATGTCCAGACATATGTAAAAAAGTGTGCTCATTGAGGTGTTCCAAAGAATGCTGCAGAGGACAGAGCGGAAAGGGAAGCATTAAACAGCAAATCCAGAATACTGCTCGGCAAGATTGTAAAAATGGCGTCGCTACAGTGGGTGGAAACGCTCAGGGTGCCTGTTGTAAGTTTCCCTTTATTTATGGGGGAGCGGTTTACTGGAGATGCACAGCTCGAAACGAAGTCAAGAAATGGTGTTCGGTCACTAAAGTGTTTGAACTGGACAGAAGATGGGGCTACTGTCCCTGGTAA

Transcript

ENSOFVT00000018593

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P50282	Matrix metalloproteinase-9 OS=Rattus norvegicus OX=10116 GN=Mmp9 PE=2 SV=1
P41245	Matrix metalloproteinase-9 OS=Mus musculus OX=10090 GN=Mmp9 PE=1 SV=2
P14780	Matrix metalloproteinase-9 OS=Homo sapiens OX=9606 GN=MMP9 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000978 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05270 all species →	AbfB	Alpha-L-arabinofuranosidase B (ABFB) domain	Domain	Interproscan
PF00040 all species →	fn2	Fibronectin type II domain	Domain	Interproscan
PF07691 all species →	PA14	PA14 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007934 all species →	Domain	Alpha-L-arabinofuranosidase B, arabinose-binding domain	Interproscan
IPR036943 all species →	Homologous_superfamily	Fibronectin type II domain superfamily	Interproscan
IPR000562 all species →	Domain	Fibronectin type II domain	Interproscan
IPR051666 all species →	Family	Seminal Plasma Capacitation Regulator	Interproscan
IPR036195 all species →	Homologous_superfamily	Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily	Interproscan
IPR011658 all species →	Domain	PA14 domain	Interproscan
IPR013806 all species →	Homologous_superfamily	Kringle-like fold	Interproscan
IPR037524 all species →	Domain	PA14/GLEYA domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22918 all species →	SEMINAL PLASMA PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046373 all species →	Biological Process	L-arabinose metabolic process	Interproscan
GO:0046556 all species →	Molecular Function	alpha-L-arabinofuranosidase activity	Interproscan
GO:0008201 all species →	Molecular Function	heparin binding	Interproscan
GO:0009986 all species →	Cellular Component	cell surface	Interproscan
GO:0048240 all species →	Biological Process	sperm capacitation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000017188.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.