Gene detail

Detailed information of ENSOFVP00000017204.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: KAJ7334369.1, hypothetical protein OS493_014680 [Desmophyllum pertusum]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7SBN6	Zinc finger CCCH-type with G patch domain-containing protein OS=Nematostella vectensis OX=45351 GN=v1g244155 PE=3 SV=1
C0HAV3	Zinc finger CCCH-type with G patch domain-containing protein OS=Salmo salar OX=8030 GN=zgpat PE=2 SV=1
Q5PPF5	Zinc finger CCCH-type with G patch domain-containing protein OS=Rattus norvegicus OX=10116 GN=Zgpat PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005907 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01585 all species →	G-patch	G-patch domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000571 all species →	Domain	Zinc finger, CCCH-type	Interproscan
IPR000467 all species →	Domain	G-patch domain	Interproscan
IPR002999 all species →	Domain	Tudor domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46297 all species →	ZINC FINGER CCCH-TYPE WITH G PATCH DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0000122 all species →	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0001227 all species →	Molecular Function	DNA-binding transcription repressor activity, RNA polymerase II-specific	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000017204.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.