Genomic Location: not available for this species
NR annotation: XP_020603974.1, retinoic acid receptor RXR-alpha-B-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families
| CDS |
| ENSOFVT00000018897 |
| Transcript |
| ENSOFVT00000018897 |
| Protein |
| ENSOFVP00000017441.1 |
| UniProt accession | Description |
|---|---|
| Q0GFF6 | Retinoic acid receptor RXR-gamma OS=Sus scrofa OX=9823 GN=RXRG PE=2 SV=2 |
| Q5REL6 | Retinoic acid receptor RXR-gamma OS=Pongo abelii OX=9601 GN=RXRG PE=2 SV=1 |
| P28701 | Retinoic acid receptor RXR-gamma OS=Gallus gallus OX=9031 GN=RXRG PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0009417 (this species only) |
| Transcription factor family | Miscellaneous · all TF in this species |
| Transcription factor family | NGFIB-like · all TF in this species |
| Transcription factor family | RXR-like · all TF in this species |
| Transcription factor family | SF-like · all TF in this species |
| Transcription factor family | THR-like · all TF in this species |
| Transcription factor family | GCNF-like · all TF in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00105 all species → | zf-C4 | Zinc finger, C4 type (two domains) | Domain | Interproscan |
| PF00104 all species → | Hormone_recep | Ligand-binding domain of nuclear hormone receptor | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001628 all species → | Domain | Zinc finger, nuclear hormone receptor-type | Interproscan |
| IPR035500 all species → | Homologous_superfamily | Nuclear hormone receptor-like domain superfamily | Interproscan |
| IPR001723 all species → | Family | Nuclear hormone receptor | Interproscan |
| IPR000003 all species → | Family | Retinoid X receptor/HNF4 | Interproscan |
| IPR000536 all species → | Domain | Nuclear hormone receptor, ligand-binding domain | Interproscan |
| IPR013088 all species → | Homologous_superfamily | Zinc finger, NHR/GATA-type | Interproscan |
| IPR050200 all species → | Family | Nuclear hormone receptor family NR3 subfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48092 all species → | KNIRPS-RELATED PROTEIN-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003700 all species → | Molecular Function | DNA-binding transcription factor activity | Interproscan |
| GO:0006355 all species → | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0043565 all species → | Molecular Function | sequence-specific DNA binding | Interproscan |
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0003707 all species → | Molecular Function | nuclear steroid receptor activity | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0000790 all species → | Cellular Component | chromatin | Interproscan |
| GO:0004879 all species → | Molecular Function | nuclear receptor activity | Interproscan |
ENSOFVP00000017441.1.
