Gene detail

Detailed information of ENSOFVP00000017655.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020629227.1, folylpolyglutamate synthase, mitochondrial-like isoform X1 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000019135

CCTCTGCGGCTCACCTATCGGCAGAAATCATGCAACAAAGAAGCTACGAAGAAGCAGTGAAGAAACTCAACTCACTTCAAACCAATGCTCAAGTGTTGCAGCAGATTCGCCGTAGCCGGGGACGACTTGCCCAAAACAACTTACCAGAAATGAGGGCCTTCACGGAACGAGCTGGAGTGAAACTCGCCACATTTGATGGAGGTCAGGGAGAGAATTAGAATCAATGGAAAACCATTACCCAAAGACAagtttgcaaaatatttttttgactGCTGGGATAACCTCTTGAATAATGGTGATGAAGACGGGAAATGTAACATGCCAGCATACTTCAGGTTTTTGACCCTGATGTCTTTCCATGTCTTTCTTCAAGAGAAGGTTGATGTTGTTATTCTTGAGGTCGGAATTGGAGGTGCTTATGATTCCACCAATATCATCAGGAAACCTGTTGCTTGTGGAGTGACATCTCTTGGTATGGACCATATCAGCACACTCGGTGGGACATTGGAAAGTATTGCCTGGCAGAAAGCTGGTATATTTAAGcCAGGTGTCCCTGCCTTTTCTGTTCCACAGCCAGAAAATGCCATGAATGTTGTAGCTAACAGAGCCAAGGAATTGAAGGTTCCTCTTCATGTTGTTCCATCATTAGAGCAGTATCCAGGAAAACTACCAGATCTCGGTTTGGAAGGAGAACATCAATTATTAAATGCATCACTAGCACTTCAACTTTGTAGTACTTGGCTGCGAAGGAAGCAGAGGAAAGAAAAAGATTCAGAAGgTGGGGAAAATGGAACAATCAGAACTGGGTCGCCCAGTGAAGACTCATATACAGAGGAACCTTCAACCAAAAAAGCAAAGTCAGAGGTTCCTGTAgctcaaacatttgaagtttctGAAGTTTTTAGAAGTGGTTTGAAGAATACCAGATGGTGTGGACGGAATCAGGTGATTGTAAGACCGCAAGTTTCATTCTACCTGGATGGTGCACACACCCCAAAGAGTATGGAGGCTTGTGCAAAGTGGTTTAAAAAAAGAGCAGAtgaggaaaaggaaaaagaaagTGGCAGTGTTGCTCGTGTATTGCTGTTCAACTTGACTGGTGATCGGGATCCTAATAGACTTCTGAAACCAATTATGAGGTGTAACTTTGACCATGCAGTTTTCTGTCCCAATGCTATAAACGAGAACCCGAAAAGCATTGATTCAGGTAATTTGACCAACTTTACTGTCACTCGTGATAGCCAACTACGATGGTGTGTTGAAAATCAGCGTGTTTGGATGGCTCTAAGAGGAGCTGGATTTCAAGCACATGCAAACCCATCACAGGATTGTACAGCCAGTGACCATGTGATTAAAAATGGACATGATGATGGTCCGTATTCCACCATATTTCCTTGTGTTTCTCAAGCTGTTCGGTGGTTGTTAGGAGGTAGGGATCCTCTTGTACCAGCATTTTTTCCCGATGACTTGCCTTTACCAGACTTCATTTCCAAGGCATCAAGGCTTCAGATTCTAATAGGAGGAAGTTTGCATCTCGTCGGCACGGCCATGAAAGTGCTAGGACCCGAAATTGTTGGAGATGTTTAGGGAAGGACTTGCTACCTGTACAAAATACACAGTACATCGTGTCAGGAATTCGTTTTCCATCTCTGCACCGTTCGGACAGTAATTTGCTTTCAATCTTCTGTTTAACTATGTAATCAGCTTCATTGCCATCTCAAGATGCAGTTGTCAAGAGTGACCCCATGTCAAAGTCAAATTTAATAAGCCTTATAATTTTTGTCACCTGTTTACTTCCTGTAACTAGACTCAATCATCTATTGTGAAGAGAGAAAGCGACCATGGTGCATCATGACCCACAATATGATGCCGGTTTGCTTCATTGGGTGAAAATATTCTGTAATGATATGtgtaataataattttacaGATATCAAATATTCTTAAATTATTTTGTGATCTTGCACTTCAGAAGATCTATAGGATCATTCTGGCAGTACTTGATTTAGGCAGCtattatattatttatttatacctTTGAAGCTATGTACAACTTATAGTTATGTTATATTGAAACAGGAGCTAAAAGAAACAgctaaaaagaaaatattcaaaCGTAAATGGAAATAACTAAAAGCAATGTGACAATTATATGCTATATTTTAAACCTGATTTTGAACAGATGAAAATTTGTcattgtccaataagttt

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P48760	Folylpolyglutamate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Fpgs PE=1 SV=3
A6H751	Folylpolyglutamate synthase, mitochondrial OS=Bos taurus OX=9913 GN=FPGS PE=2 SV=1
Q05932	Folylpolyglutamate synthase, mitochondrial OS=Homo sapiens OX=9606 GN=FPGS PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002827 (this species only)

Pfam domain

No Pfam domain signature was detected for ENSOFVP00000017655.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR001645 all species →	Family	Folylpolyglutamate synthetase	Interproscan
IPR036565 all species →	Homologous_superfamily	Mur-like, catalytic domain superfamily	Interproscan
IPR036615 all species →	Homologous_superfamily	Mur ligase, C-terminal domain superfamily	Interproscan
IPR018109 all species →	Conserved_site	Folylpolyglutamate synthetase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11136 all species →	FOLYLPOLYGLUTAMATE SYNTHASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004326 all species →	Molecular Function	tetrahydrofolylpolyglutamate synthase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0009396 all species →	Biological Process	folic acid-containing compound biosynthetic process	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan
GO:0016881 all species →	Molecular Function	acid-amino acid ligase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0046901 all species →	Biological Process	tetrahydrofolylpolyglutamate biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01930	FPGS; folylpolyglutamate synthase	EC:6.3.2.17	Antifolate resistance	ko01523	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.