Gene detail

Detailed information of ENSOFVP00000018967.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020623738.1, synaptic vesicular amine transporter-like isoform X2 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000020519

TTCCAATTATTCCAGTATATTTGGATATAATTGACAAACCAATGGACAAAGCACCAATAGCTGCTGACAATTCAACTAAAAACAGCACATTAACCACTGCTTCCTCATTAGTGACAACTGATTCATCTATGGATTTTAAAATTGGAGCATTATTTGCATCCAAAGCCTTTGTTCAGATCCTAGTGAATCCAGGTGCTGGGCATTTAACAGAAAGAGTGGGTTACAACATCCCATTATACATTGGCTTCTGTGTGTTATTTATATCAACTCTTGTGTATGCGTTCGCAGAGAGTTATGGACTTCTCTTCTCAGCCCGGGCTATCCAGGGATTAGGTTCCTCCTTCATTCTTATTTCTAGTTTAGCAATGCTTGCAGCTGCCTACCCTGATGATGATGAGCGTGGCACTGCTATAGGAATTGCCATGGGAACAACAGCTCTTGGAGTGTTAGTTGGACCACCATTTGGAGGACTTTTTTACACTGTTGGTGGCAAAGGCCTTCCATTTTTCATCCTTGCTGGTTTAATTTTTCTTACATTTGTATTGGTGGTCATTGCTAAGAAGCCAGTTATGCCAGACCTTACTGTTAAACCGACACTCAAGGACTTGTTGTCAGATCCCTACATTCTGATTGCTAGTGGTGCTGTCTGTTTCTGCAACATGGCATTTGCTCTGCTAGAGCCAACATTACCCATTTGGATGCTGGAAACCATGAATGCCAAGAAATGGCAGATAGgtgtcattttCCTGCCATGCACTGGAGCATATCTTATAGCCACTCCTCTTTTAGGAAAACTGGGAAACAAGATAGGCAGGTGGTGTGCAGCTATAATTGGCCTTGTGTTGGTCGCAATAAGTTTATGTGTGGTTCTGGCTGCTAAGACTGTAGCGGTTCTTGCAGCTCCACTGTTTGCCCTGGGGTTTTCTATCGGAATGGTGGATGCCTCTATGGCAGCAGCCCTGGCCAACCTTGTGGACTTAAGGCACGCCTCTGTGTACGGCAGTGTCTTTGCTATCGAGGACTTCGCAGCTTCTGTTGGATTCGCCTTTGGACCGCTTATTGGAGGAGCAGTTGTGGCTAAAGGGAGCTTTCCGTGTTTCAGTAATTGATGAAGAAAGAGAATCAGAAGCGTTGTGACAGCAAGATTACAAGGAGAAATTCGCTAGCATGTAAGGTGGAATAATTTATCTTGGGTGCAAGTAGTTCAGTTTTATAATATGGAAATGTGGGGTACGGAATCTCCTCTTGTCGAATAGTCTCCGCGGTCGTCTCACGGAATGTtacagcctcgttcccagggtcttttccctggcttgggggcgGGAAAataccctgggaacgaggttgggaatGTTAGGACATGGACAATGGTTATGTGACAACTCACATAACATTGTGTGACACGTCTTCGACGCATGCAGTTTCTCATCTTTAGGATCTGGGAATTAGGCCTGTTTAGGAATGCAGCGAGCCCGCACTTTTTCAGACGTACGTCGCTAAGCAACATTGTTTATCCATTCAGCGCCATTTTCACGTAAATCCTCTCGGTACGCTGTTGAGCATACCCCGCTTTCTACTGACAAATCTCGCTCACCGGCAGTTACTTTTTATTCCCAATGGTTAGTGCGTGATTCAGATGAATAAAAATGGTAATCGGCAGTAGACTGGGATCCCACTCAGTGCGGGGAAGTGGGGGCGGGGGGGGACACTCTAGTGACTGTTATCTGGCAAGCGCGCTAGCTTTATCTGAAACTGTTCTTGTGCCTTCATTTTAGGttacaaatatttaatttagcgaCGAAGGGAAGCCTTGCCGCTGCTGTCCGATCACGGATGTTCGTTCCAGTGGTAAAGATGAAACATGCTTCCTATTTTATGGGAGTAGTTCCTCTCGTTTGGAGTAGGATGTGATCCGTTCCTCGGTTACTCCACCACTGGAAGTTAAACAACAACCGCACATGAAACTAGCACACGAATGAATGTTTTTTAAAACGGTCAAAAACAATTGTCACGTTTGTACTTGTTGTACTTGTTGTTGTAAGTTacatttaataaaaacgttccACTTTTGCTGGTTCGGTGGCTTATATATATTC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BRU6	Synaptic vesicular amine transporter OS=Mus musculus OX=10090 GN=Slc18a2 PE=1 SV=1
Q01827	Synaptic vesicular amine transporter OS=Rattus norvegicus OX=10116 GN=Slc18a2 PE=1 SV=2
Q05940	Synaptic vesicular amine transporter OS=Homo sapiens OX=9606 GN=SLC18A2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010321 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690 all species →	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR020846 all species →	Domain	Major facilitator superfamily domain	Interproscan
IPR050930 all species →	Family	Major Facilitator Superfamily Vesicular Transporter	Interproscan
IPR011701 all species →	Family	Major facilitator superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23506 all species →	-	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0005335 all species →	Molecular Function	serotonin:sodium:chloride symporter activity	Interproscan
GO:0015842 all species →	Biological Process	aminergic neurotransmitter loading into synaptic vesicle	Interproscan
GO:0030672 all species →	Cellular Component	synaptic vesicle membrane	Interproscan
GO:0043195 all species →	Cellular Component	terminal bouton	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000018967.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.