Gene detail

Detailed information of ENSOFVP00000019175.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020615185.1, 3-hydroxy-3-methylglutaryl-coenzyme A reductase-like [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

ENSOFVT00000020728

ATGGAGTTGGAGACCATTTGTCAGTTTGGTTGTTTGTCTCTGGTTACCCATTATGTGATTTTCATGACCTTCTTTCCAGCCTGTCTATCGTTGTTTTTAGAGCTGTGCACAGGTCAGGGTCACAGTAGACCAAGGTGGCAATTAGAGTGCACAGATGTCCCAGTTGATGAACTTGAACCCAATCCTGTGGTACAGGGTGTCAAGCTTATTATGTCCACAGGTCTGATGTTAATTCATGTGCACCGATGGTTAATGGTTAAAGGTGACAGCTATGAAAGTGTTCATGATGCTTCATTTGAGGAAAGTGGGTTTAAAAGgTTTTTGGAGGGAAATACTGAACAGATTGTAGTGGTAGTGTTTGCTGTTGGCCTAGCAGTTCGATACTTGTTAATGGACAATGAGGACAGAATTTATGATCATGTCGAGCACAAGCAAAAACTGACATCTTTGGATCACAAAGCATTGTTTCCTGTGGGAGTCACTGACCAAGTTGAAGGATCAGAACAAGTCTGCTCAAGccaagagaaaaacaaacatggacCAAGTTCTGCTCTATTTCTTAAAAATGCGAATGCAAAAAGTGTGGCTTCAAAAAAGGTTACTAGAACAAGGTCTGATTTCAGTCATCTACCAAGAAAAGAGTCAGTTGATGAAGCATTTGAAAAAGACTTCAGTGGTGTTGATGTGAGAAGGAAGGTATTAGATAGAAGAAGAACAGTAAGTGAAGGTGACTGTGCTAATGATTGCCAAATAAATGGTGATAATCAACATCCTGAAGGGCTTATAAGAGCAGACAATAGTCCACCAGCAGTCCACCAAGATCGGAGCTTAGAAGAGTGCAAGCTGATGTTGAAGCAATCAGATGGAGTGTTTAGCTTGAGTGACAAGGAAATACAGATGTTGGTTGAATCTAAAACCATTCCTGGGCATCAGCTTGAAAAGGTTTTAAAAGATCCAGCAAGGGCAGTTAAGATCAGGCGGAGTGTGGTATCAAAGAAACTTCCAACAGTTGGAGATATGGTTGATCTTCCTTGTGATCACTATGATTACTCTGATGTTGTGGGAGCTTGTTGTGAAAATGTCATTggttacatgcctgttcctgtGGGTGTTGCTGGACCTCTGTTGCTTAATGGTGAAAACTATCATGTTCCCATGGCAACCACAGAAGGATGTCTTGTAGCAAGTACTAATCGAGGATGCCGAGCTCTCCTGCTGAGTGGTGGTGTAAGAAGTTCTGCGTTTGGAGATGGCATGACACGAGGACCTGTTGTAAGATTTCCTTCAGCTTTACTTGCCAGTGATGTGAAAATGTGGTTAGAAGAGGAGAAGAATTTTATGGAAATCAAACAGGTGTTTGACAGTACAAGCAGGTTTGCAAGACTACAATCTGTGAAAGGAGTGGTTGCTGGTCGCTTGTTGTTCATCAGATTTGCAGCAACTACTGGTGATGCTATGGGCATGAACATGGTGTCAAAGGGAACAGAGAAAGCCCTGTCTTGCTTGCATGGGCACTTCCCTACTATGGAGGTGTTAAGCTTGAGTGGAAATGTTTGTACAGATAAAAAATCAGCAGCTATAAACTGGATTGAAGGCAGAGGGAAGTCTGTTGTGTGTGAGGCTATTGTACCAGGACATGTTGTACAAAAGGTTTTGAAGACAACAGTGTTTGCGCTTACAGAACTCAATGCCAGCAAAAATCTTGTTGGTTCTGCCATGGCTGGTGCCATTGGAGGATTTAACGCTCATGCAGCTAACATAGTAACAGCAATATTCATAGCCACAGGCCAGGACCCTGCACAGTGTGTTTCAAGTTGCAACTGCATCACTTTATTAGAGCCTTGTGGATCTACTAAAGAAGACTTGTACATCAGCTGTACAATGCCATCATTGGAGGTTGGAACAGTAGGAGGGGGTACTGTTCTTGGTCCTCAGTCAGCCTGTCTTAAGATGCTTGGTGTTAGTGGAGCCAGCAAATCAGAGCCAGGCAAGAATTCAACAAAACTTGCACAAATTGTGTGTAGCACAGTCCTTGCTGGGGAGTTGTCGTTACTTTCAGCTCTCGCTTCAGGTGATCTTGTGAAAAGTCACTTAACACTAAATAGGTCGACAGTAAATCTCCTCCTCGCAGAAGATGCTAGCAAAAATTGTGCAGTATTGTAG

Transcript

ENSOFVT00000020728

GATGCAGTGCCCAGCAGGATAGCTGAGAGTATTGCTTCCTTGGGTCCAACAGTCACTCTTAATACTCTTGTGGGAACTTTGGTTATTGGGATTGGAACCCTTTCAGgagTCATGGAGTTGGAGACCATTTGTCAGTTTGGTTGTTTGTCTCTGGTTACCCATTATGTGATTTTCATGACCTTCTTTCCAGCCTGTCTATCGTTGTTTTTAGAGCTGTGCACAGGTCAGGGTCACAGTAGACCAAGGTGGCAATTAGAGTGCACAGATGTCCCAGTTGATGAACTTGAACCCAATCCTGTGGTACAGGGTGTCAAGCTTATTATGTCCACAGGTCTGATGTTAATTCATGTGCACCGATGGTTAATGGTTAAAGGTGACAGCTATGAAAGTGTTCATGATGCTTCATTTGAGGAAAGTGGGTTTAAAAGgTTTTTGGAGGGAAATACTGAACAGATTGTAGTGGTAGTGTTTGCTGTTGGCCTAGCAGTTCGATACTTGTTAATGGACAATGAGGACAGAATTTATGATCATGTCGAGCACAAGCAAAAACTGACATCTTTGGATCACAAAGCATTGTTTCCTGTGGGAGTCACTGACCAAGTTGAAGGATCAGAACAAGTCTGCTCAAGccaagagaaaaacaaacatggacCAAGTTCTGCTCTATTTCTTAAAAATGCGAATGCAAAAAGTGTGGCTTCAAAAAAGGTTACTAGAACAAGGTCTGATTTCAGTCATCTACCAAGAAAAGAGTCAGTTGATGAAGCATTTGAAAAAGACTTCAGTGGTGTTGATGTGAGAAGGAAGGTATTAGATAGAAGAAGAACAGTAAGTGAAGGTGACTGTGCTAATGATTGCCAAATAAATGGTGATAATCAACATCCTGAAGGGCTTATAAGAGCAGACAATAGTCCACCAGCAGTCCACCAAGATCGGAGCTTAGAAGAGTGCAAGCTGATGTTGAAGCAATCAGATGGAGTGTTTAGCTTGAGTGACAAGGAAATACAGATGTTGGTTGAATCTAAAACCATTCCTGGGCATCAGCTTGAAAAGGTTTTAAAAGATCCAGCAAGGGCAGTTAAGATCAGGCGGAGTGTGGTATCAAAGAAACTTCCAACAGTTGGAGATATGGTTGATCTTCCTTGTGATCACTATGATTACTCTGATGTTGTGGGAGCTTGTTGTGAAAATGTCATTggttacatgcctgttcctgtGGGTGTTGCTGGACCTCTGTTGCTTAATGGTGAAAACTATCATGTTCCCATGGCAACCACAGAAGGATGTCTTGTAGCAAGTACTAATCGAGGATGCCGAGCTCTCCTGCTGAGTGGTGGTGTAAGAAGTTCTGCGTTTGGAGATGGCATGACACGAGGACCTGTTGTAAGATTTCCTTCAGCTTTACTTGCCAGTGATGTGAAAATGTGGTTAGAAGAGGAGAAGAATTTTATGGAAATCAAACAGGTGTTTGACAGTACAAGCAGGTTTGCAAGACTACAATCTGTGAAAGGAGTGGTTGCTGGTCGCTTGTTGTTCATCAGATTTGCAGCAACTACTGGTGATGCTATGGGCATGAACATGGTGTCAAAGGGAACAGAGAAAGCCCTGTCTTGCTTGCATGGGCACTTCCCTACTATGGAGGTGTTAAGCTTGAGTGGAAATGTTTGTACAGATAAAAAATCAGCAGCTATAAACTGGATTGAAGGCAGAGGGAAGTCTGTTGTGTGTGAGGCTATTGTACCAGGACATGTTGTACAAAAGGTTTTGAAGACAACAGTGTTTGCGCTTACAGAACTCAATGCCAGCAAAAATCTTGTTGGTTCTGCCATGGCTGGTGCCATTGGAGGATTTAACGCTCATGCAGCTAACATAGTAACAGCAATATTCATAGCCACAGGCCAGGACCCTGCACAGTGTGTTTCAAGTTGCAACTGCATCACTTTATTAGAGCCTTGTGGATCTACTAAAGAAGACTTGTACATCAGCTGTACAATGCCATCATTGGAGGTTGGAACAGTAGGAGGGGGTACTGTTCTTGGTCCTCAGTCAGCCTGTCTTAAGATGCTTGGTGTTAGTGGAGCCAGCAAATCAGAGCCAGGCAAGAATTCAACAAAACTTGCACAAATTGTGTGTAGCACAGTCCTTGCTGGGGAGTTGTCGTTACTTTCAGCTCTCGCTTCAGGTGATCTTGTGAAAAGTCACTTAACACTAAATAGGTCGACAGTAAATCTCCTCCTCGCAGAAGATGCTAGCAAAAATTGTGCAGTATTGTAGGAAGCCTGACCACAACTCGCTACCACTAAGAGTTAGCAAATGTTGTTGATTAACTAACGACAACTGCGAGGCAGTCTCAGTGGCACTATTGGGATGTTTTGTCAGTGCTAAAATTACCACCATCATTACACTGATGCCTAATTCTGCCGGACTTAGAAGCAAGTCAGCAAGTTCCACGATAGAAGCTACTGTTTAGTGATACACCGAGGCTTCATTCGTTGATTGTCAGATGGTCTGATCACGAGATTGCTCGATCTGACAGAACGACATCGGACCGTCTGAGATTCAGATCAGACTAAGGTTTCATGTTCAGGCTTAAAAAGTCGGAAGACAGCCGAGATGACCAGTGACTGAAATCCGTCAATCAGGATGCTTTTGTTTGCTGGTGTATTGGGCCGGGTAAAGGTTCTGTGCTCATCAGTTCAATGAAGTCTTCTAATTAGTCTTTTGTCAATCAAGCTTGGTTGACTCTAGCCTCGTCACGTAATCTTCCCACCCAAACGTCTGAAAGATTGTGTTATGAGTCCAACGGAAGTCTGCGTGTAGCTTAATCTTGACTTGAATGAATGACTTGTGTTCTGCTCTAGGAGTGATAGGGTTATGGGATCGCTGGGTCAGATAGTTGTTGAAATGTTTCAAAAGCCATCTTTGGAGATTGAAATTAACTCTGTTCAAGCTCAAACGAATTTTAATATATGCATACGGCAAAAGGAATGATATCATATTTTAACCACGACAAGAGATCAAATCATCTGCGAGAATTTTATTTAGTATTaactattttttgtttgttgcaAAGAATCGAGTGACAGTGCCTTGTCAATGAGTGAAGACAAATTTTATTTCTACTTGTTAGAAAATTACTACTTCAATTACAATTGTGgtagaaaaaaattcaatttaagGTGTTTGTTCTTTATTTCCGGTATTTTATCAAATGAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q29512	3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Oryctolagus cuniculus OX=9986 GN=HMGCR PE=3 SV=1
P04035	3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Homo sapiens OX=9606 GN=HMGCR PE=1 SV=1
P20715	3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Xenopus laevis OX=8355 GN=hmgcr PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005293 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00368 all species →	HMG-CoA_red	Hydroxymethylglutaryl-coenzyme A reductase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002202 all species →	Family	Hydroxymethylglutaryl-CoA reductase, class I/II	Interproscan
IPR004816 all species →	Family	Hydroxymethylglutaryl-CoA reductase, metazoan	Interproscan
IPR023074 all species →	Homologous_superfamily	Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily	Interproscan
IPR023282 all species →	Homologous_superfamily	Hydroxymethylglutaryl-CoA reductase, N-terminal	Interproscan
IPR000731 all species →	Domain	Sterol-sensing domain	Interproscan
IPR023076 all species →	Conserved_site	Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site	Interproscan
IPR009023 all species →	Homologous_superfamily	Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily	Interproscan
IPR004554 all species →	Family	Hydroxymethylglutaryl-CoA reductase, eukaryotic/archaeal type	Interproscan
IPR009029 all species →	Homologous_superfamily	Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10572 all species →	3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004420 all species →	Molecular Function	hydroxymethylglutaryl-CoA reductase (NADPH) activity	Interproscan
GO:0015936 all species →	Biological Process	coenzyme A metabolic process	Interproscan
GO:0005778 all species →	Cellular Component	peroxisomal membrane	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0008299 all species →	Biological Process	isoprenoid biosynthetic process	Interproscan
GO:0016126 all species →	Biological Process	sterol biosynthetic process	Interproscan
GO:0050661 all species →	Molecular Function	NADP binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0016616 all species →	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000019175.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.