Gene detail

Detailed information of ENSOFVP00000019755.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_022808434.1, tubulin--tyrosine ligase-like protein 12 isoform X2 [Stylophora pistillata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000021307

CGCGGcgaaccaagatggcggacgaagCAGAGTATTCCCAATTCTTGGCGTTACATAGAGGCCAATTAGAAGTTACTGGTATTCCTGTTCAGTTTTGGAAAACTCTCCACGAGAAGTTGAAAAATGAGaCTTATGATGCTGGATTGTTCTTTACCATGGCTAAGGATGAAGAAGGAAGTTTGAAAGTTTTTGTTACCAGTGAAGAAGGAATAAAAGTTTCAGATCCAAATTGTGTGTTTTTAATTGATCATGCCTGGACGTACCAAGTAAACTATGCACGTGCACAGCTTAAAGTGGTAGCTGGTCTTGCTGACAGAATGGGCTCTTTAATGGGATTGACAAACGAGGAGTCTACAATTAGTCAAGAGCAGCTTATTGAAGAAATCTTTGAGAACATGTGGAGttttaatCAGAGTTACCATTTAAAAAAGATGGCATATTCCTACTCCGATGGCCAAGTTTATGAAAAGAGCAtcactgatgatgatgatgagcaGTATACTCCGTTGTGGTTTGTCATGGATGAATTTGGTTCTTGTATAATGCATTCAGATGATCCCTCCTTTGCCATAGCTGTCATTTATTATACACCTCTTAAGGTCACCTTTTCAGTATTGTGGCCTTTGAAGGACATGGATTATGGAGAGGAGGTTACCAGAGACTATCTGCCACATATCAAGGCGCCTATTATGAGAGAGTGTTGTCTGTTGCCATGGTTTCCTGAGAAGTTGACAGACCAAGAGTGGATTGATAAGTTATCTGATGAAACAACATTGGAATTTGTAAGAAAAGAACTCAGTGCATTACAGATGAAGgACTGGCAGGCTGAGGTTTATCCTACCCTAGAGAACAGAGAACCTACTGCATCAAAGCCTGACAGTGAAAAAATCTATCGTGTGTTCACTGATGTTCAACAAGTGAAAGAGTTTCTGACACATCCAAGATTTGTTTTAGTGGACAGTAGAGGAGAAGCAGACATTTTATGGATTAGACAacattttaaagattttagATCTTTACAAGAAAGTGGTCAATTTATAAACCAGTTTCCCAATGAAAATAGCCTGGTATGCAAAGACCTCTTAGCAGCAGTTTGTCAGAATGCAACTCTCCATGAAGATGGCAAAGAGGATGATTTGCTCAGGAGGGGACCAGAATGGCTGCCTGTTACATTTAACTTAAATTTTGAACTCCCACTGTTCCTTCATCATTACCTCAAAAGAAAAGCAAGaGGGCTTGACAATCACTGGATATGTAAGCCATGGAATCTGGCAAGGGCTCTTGACAGTCATGTGACATCAAATCTAAACTACATATTAAGACTGCTTGGAACAGGGCCTAAGGTTGCCTGTAAATACATAGAGAATCCAGTTCTGTTTCATCGTGAAGATGTAGGTCAAGTGAAGTTTGACGTTCGCTATCTGGTGCTCATCTCCTCAGCGAAGCCACTTGTACTTCATGCAGATAAAGTTTTCTGGTTGAGATTTGCAAACGAGCCTTTTTCATTGGATTCCTTTGATGTTTACTCGAAACATTTCACAGTCATGAATTACAAGGATAGTCAAAATTTAAAACAGGTGCATCACCATGAGTTTATACCTATGTTTGAAAAACAATATCCTTCTCACAAATGGGCAGATGTCGAGAGCAAGATTTTCAAAATGTTCCGGGGGATGTTCGAAGCGGCGATCTCCGATTCGCCGCCCAAGACCTTGTTACATTGTGCACAGtCTCGTGCATTTTATGCCGTGGATTTGATGCTTAAATGGGCGGACGATGGCTCAAACGAAATAATTCCTCAAGTTCTAGAAGTGAATTACTGCCCTGACTGTGAGCGAGCATGCCGTTATCATCCAAACTTCTTTAACTATATATTTAGTTTGCTGTTTCTTGGAGATTCGAATGGATGGCCTGTGGAAAAAATAGCCTGAAACATCTCTTACATCGCTAGAATTGTCTCTAATTTAATGTCCTCGATGGGCGTGGTACTATCTCAAAGCCACCAGTGTTCCGCTGCCCGTCTCTAGAAGCTACAAGTGATTCCTAAGAATCTCCGACCTGTAGCTTAGTGGCTGTCAAATTAATTTCCGGAAAATCATAAGATCCACCTCCTTTAGGAGAGCGCAGCAAATGTTTTCAACTGTCTTGCGTTGATGTCTAAACcattaaaatattttctcttctaTGCTACACCGGTcttaatttaaaacaattttttccaCACTTGTTATCGAGGAATAcgaacaaaacaatttttcaagCCCGTCAAATCAAACCAAGTGTATTTGCAATTTCTGTCTAATCCTAATTACAGCAACTAAATAAAATCGTGCTACATTTCTTGTCACATAAGACTctatttattacatgtaaataacagttaaattcaataaaaatacCGTGCCACTCAGTACACCGATCTGCGTAGCTGTTTGTCCGTATTTGTATAATATTTTCATTATTGTGTTCAGTGTTCTAGTTTATTCCTGTGCCTTGGTATATGTAACTTGGTTTATAAAGCTGAGATATGTAGGAGAAACAAATTAGACATCTTGAATGAAAGGG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3UDE2	Tubulin--tyrosine ligase-like protein 12 OS=Mus musculus OX=10090 GN=Ttll12 PE=1 SV=1
Q14166	Tubulin--tyrosine ligase-like protein 12 OS=Homo sapiens OX=9606 GN=TTLL12 PE=1 SV=2
Q09512	Tubulin--tyrosine ligase-like protein 12 OS=Caenorhabditis elegans OX=6239 GN=ttll-12 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004204 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03133 all species →	TTL	Tubulin-tyrosine ligase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004344 all species →	Family	Tubulin-tyrosine ligase/Tubulin polyglutamylase	Interproscan
IPR027749 all species →	Family	Tubulin--tyrosine ligase-like protein 12	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46088 all species →	TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0036211 all species →	Biological Process	protein modification process	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16609	TTLL12; tubulin--tyrosine ligase-like protein 12	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.