Detailed information of ENSOFVP00000019875.1 in Cyphastrea salae

Genomic Location: chr2:33075440...33080965
NR annotation: XP_020627687.1, selenoprotein F-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O60613Selenoprotein F OS=Homo sapiens OX=9606 GN=SELENOF PE=1 SV=4
A8YXY3Selenoprotein F OS=Bos taurus OX=9913 GN=SELENOF PE=2 SV=2
Q923V8Selenoprotein F OS=Rattus norvegicus OX=10116 GN=Selenof PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009109 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08806
all species →
Sep15_SelMSep15/SelM redox domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038219
all species →
Homologous_superfamilySelenoprotein F/M, thioredoxin-like domain superfamilyInterproscan
IPR039992
all species →
FamilySelenoprotein F/MInterproscan
IPR014912
all species →
DomainSelenoprotein F/M domainInterproscan
IPR036249
all species →
Homologous_superfamilyThioredoxin-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13077
all species →
SELENOPROTEIN FInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005788
all species →
Cellular Componentendoplasmic reticulum lumenInterproscan
GO:0016491
all species →
Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOFVP00000019875.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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