Gene detail

Detailed information of ENSOFVP00000019890.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020618978.1, potassium channel subfamily T member 1-like isoform X1 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

ENSOFVT00000021441

ATGATAGCCATTGCTCTCATTCTTCTTCCTGTTGAGTTAGAGCAGTTGGCTTTCCTCTTGGTAACTCGTCAGAAAGAAGGTGGTGCATTTAATCGCATGCTGGCTGGCTCTGACAAACATGTGGTTTTATGTGCAACAATCCTGAGGCCAACTATGCTGATCGATTTCTTGAATGAGTTCTATGCTGATGGTAGATTACAGGATGTTCATGTGGTTCTTCTTTGCCCTTCGGATCTTGACAGCACTTTAAGAATGTTGTTACAAGTTCCACTATGGTCTCAGAGAGTAACATACTTAAAAGGATCGGCCCTTATTGATGAAGACCTGATAAGAGCTAGGGTTGAGGATGCTGAGGGATGCTTTATACTCACAGACAGATATGCTGATGACAGGGAGGCAGCTGACAAGCACACCATTTTGAGGACCTGGGCCATCCAGGACTTTGCACCAGCCACACCTCTTTATGTGCAGATCCTTAAGCCAGAGAACAAGTTCCATGTTAGCTTCGCTGAACATGTAGTCTGTGAGGATGAAGTCAAACATGCACTGTTGGCTAGTAACTGTGTGTGTCCAGGAATCTCAACTTTTTTCACTCTTCTTCTCCACACTCTTCACGAACAGAGTGGATCAGAGGATTGGCATGATATATATGGCAAGTGTGCAGGAAATGAAATATATGACATTCAGTTGGGTAAAAGCGAGATCTTCAGGCCATACGCTTACAAGACATTTGCACATGCTGCCTTCCATGCACACAAGAAGTATGGAGTGACACTCTTTGCAGTTCATCCAGTTGGGAAAAATAAACGCATTATGTTAAACCCTGGGCCCTCACATGTGATGAAATATGAGGATCGTTGCTTCTACATTGCAATCTCGAGTGAAGAAGACACTGCCTTCAAAGCCTACAAGGAGCCAAAAGAGCCAGTTGGCTTGTTTAGGGGCAGCCTTCGACAAAAAAATGACTCCTTTATCACTGCAAGCTCTGTAGCTCTTGAACTAAGAACAGATGTAGCTGAACCAGTTGGCCTCAGATACTTAGACGAGGCTCCTGCAAATGGTGTCGGACACACAACCTCTCATGATAAAGTCACGCCTTCCTCGACTCTCAAACCAGGGCATGATCAGGAATCTCCCGTGAGGAAAGTTTCAAGAGGAACTAAAGAGGTTAATTTTGATATAGCGGATTCTAGAAGATCGTCAAACTCTGTGTATGTACCCAATGAATCAGATTCTGAGGAAGGAGAAGCTTCTGAGCAAGAGATGGATTTTCTTGATGACACAAGTAGAATTCCTAATTATGTGGCAGGAGTCCCACCATGCTCATTGTATATTGGGCGCACACCTATAAGATGCCACCTTCTGAAGACTCCTAAAAAGTGTTGTTGTTTAGGACTTAGGAATGAGGCCTGTTTGGACAGAGATCTAAATGACAGTGCAAGATTACATCAGAGGCAGCATGGAGCTATTATTGTGGCATCTCCTGTTGCAGAAGCTGGATTGTACAACTTCATTCTTCCTTTGAGAGCTTATCAGCGCCCTAAGTGCACCCTTAAACCTATTGTGTTACTTCTAAAAGAAGAACCCAATGAAGATTTCTTGATGGCCGTTTGCCGCTTTCCCATGGTGTATTACATGATAGGAACTATAAACAGTCTAGATGACCTTCTCAAAGCTGGTTGTCTACACGCTGACAGCATAGTGGTGGTAGGCCATCGGTGTCATGGTCAGATGTATGATGAAGAACACATGGCAGATGCTAACACCATAGTGGATGTACAAAGTATCTACAGATGCTTTCCAAGAGCAACTCTGATTGTTGAACTGACACATGCCTCCAACATGCGCTTTATGAAGTTTAATGCTGACATGGCTCTTCCTCCTGGAATACAAAGTGAATCATTGGCCAGTTTTAAAACACGAAGCTTCCGAGAGAGTGTTAAGAGGCGAATCAAACAGGAAAACAAGGACCACCTCAACTACATGTTCCGTGAGCCTTTTGCTGCTGGTCATGTGTTCAGCATGAGCATGCTTGATACTCTGCTCTATCAGGCATTTGTTAAGGAGTACATGATTTACCTGGTCAGACTGTTGttaggctgtgaacagtctccGGGATCAGGATATCTCTCTTCGCGGAAGGTAACTGAGGATTACATTTGGATTGAGACTTATGGAAGGCTTTTCCAACGACTTTGCTCAACCACTGGTGCAATTCCTATTGGCATATATCGATCACATGCTCCAGAGGAGGACTTCATTGATgcttttccaaagagaagaaagaaagagattCGCGACATCTCAGACATCATTGAGCACAGAATGAAAACTCTTAATATCATTGGAACTGCTGACATGACCCACAGAGCAAGCAATTCCTATGTGATAGTTAACCCAAATCCAGAATTTGAGTTACAAGAAGGAGATATCATTTACCTGATTTGTCCATGTAACACACACACATCAGATGCAGAGGAAGAGCCAACTGATCCAGACATGAGTGATAACTTGCCCAGTACAAATCTGTGA

Transcript

ENSOFVT00000021441

CATGATAGCCATTGCTCTCATTCTTCTTCCTGTTGAGTTAGAGCAGTTGGCTTTCCTCTTGGTAACTCGTCAGAAAGAAGGTGGTGCATTTAATCGCATGCTGGCTGGCTCTGACAAACATGTGGTTTTATGTGCAACAATCCTGAGGCCAACTATGCTGATCGATTTCTTGAATGAGTTCTATGCTGATGGTAGATTACAGGATGTTCATGTGGTTCTTCTTTGCCCTTCGGATCTTGACAGCACTTTAAGAATGTTGTTACAAGTTCCACTATGGTCTCAGAGAGTAACATACTTAAAAGGATCGGCCCTTATTGATGAAGACCTGATAAGAGCTAGGGTTGAGGATGCTGAGGGATGCTTTATACTCACAGACAGATATGCTGATGACAGGGAGGCAGCTGACAAGCACACCATTTTGAGGACCTGGGCCATCCAGGACTTTGCACCAGCCACACCTCTTTATGTGCAGATCCTTAAGCCAGAGAACAAGTTCCATGTTAGCTTCGCTGAACATGTAGTCTGTGAGGATGAAGTCAAACATGCACTGTTGGCTAGTAACTGTGTGTGTCCAGGAATCTCAACTTTTTTCACTCTTCTTCTCCACACTCTTCACGAACAGAGTGGATCAGAGGATTGGCATGATATATATGGCAAGTGTGCAGGAAATGAAATATATGACATTCAGTTGGGTAAAAGCGAGATCTTCAGGCCATACGCTTACAAGACATTTGCACATGCTGCCTTCCATGCACACAAGAAGTATGGAGTGACACTCTTTGCAGTTCATCCAGTTGGGAAAAATAAACGCATTATGTTAAACCCTGGGCCCTCACATGTGATGAAATATGAGGATCGTTGCTTCTACATTGCAATCTCGAGTGAAGAAGACACTGCCTTCAAAGCCTACAAGGAGCCAAAAGAGCCAGTTGGCTTGTTTAGGGGCAGCCTTCGACAAAAAAATGACTCCTTTATCACTGCAAGCTCTGTAGCTCTTGAACTAAGAACAGATGTAGCTGAACCAGTTGGCCTCAGATACTTAGACGAGGCTCCTGCAAATGGTGTCGGACACACAACCTCTCATGATAAAGTCACGCCTTCCTCGACTCTCAAACCAGGGCATGATCAGGAATCTCCCGTGAGGAAAGTTTCAAGAGGAACTAAAGAGGTTAATTTTGATATAGCGGATTCTAGAAGATCGTCAAACTCTGTGTATGTACCCAATGAATCAGATTCTGAGGAAGGAGAAGCTTCTGAGCAAGAGATGGATTTTCTTGATGACACAAGTAGAATTCCTAATTATGTGGCAGGAGTCCCACCATGCTCATTGTATATTGGGCGCACACCTATAAGATGCCACCTTCTGAAGACTCCTAAAAAGTGTTGTTGTTTAGGACTTAGGAATGAGGCCTGTTTGGACAGAGATCTAAATGACAGTGCAAGATTACATCAGAGGCAGCATGGAGCTATTATTGTGGCATCTCCTGTTGCAGAAGCTGGATTGTACAACTTCATTCTTCCTTTGAGAGCTTATCAGCGCCCTAAGTGCACCCTTAAACCTATTGTGTTACTTCTAAAAGAAGAACCCAATGAAGATTTCTTGATGGCCGTTTGCCGCTTTCCCATGGTGTATTACATGATAGGAACTATAAACAGTCTAGATGACCTTCTCAAAGCTGGTTGTCTACACGCTGACAGCATAGTGGTGGTAGGCCATCGGTGTCATGGTCAGATGTATGATGAAGAACACATGGCAGATGCTAACACCATAGTGGATGTACAAAGTATCTACAGATGCTTTCCAAGAGCAACTCTGATTGTTGAACTGACACATGCCTCCAACATGCGCTTTATGAAGTTTAATGCTGACATGGCTCTTCCTCCTGGAATACAAAGTGAATCATTGGCCAGTTTTAAAACACGAAGCTTCCGAGAGAGTGTTAAGAGGCGAATCAAACAGGAAAACAAGGACCACCTCAACTACATGTTCCGTGAGCCTTTTGCTGCTGGTCATGTGTTCAGCATGAGCATGCTTGATACTCTGCTCTATCAGGCATTTGTTAAGGAGTACATGATTTACCTGGTCAGACTGTTGttaggctgtgaacagtctccGGGATCAGGATATCTCTCTTCGCGGAAGGTAACTGAGGATTACATTTGGATTGAGACTTATGGAAGGCTTTTCCAACGACTTTGCTCAACCACTGGTGCAATTCCTATTGGCATATATCGATCACATGCTCCAGAGGAGGACTTCATTGATgcttttccaaagagaagaaagaaagagattCGCGACATCTCAGACATCATTGAGCACAGAATGAAAACTCTTAATATCATTGGAACTGCTGACATGACCCACAGAGCAAGCAATTCCTATGTGATAGTTAACCCAAATCCAGAATTTGAGTTACAAGAAGGAGATATCATTTACCTGATTTGTCCATGTAACACACACACATCAGATGCAGAGGAAGAGCCAACTGATCCAGACATGAGTGATAACTTGCCCAGTACAAATCTGTGATAAGATTGGTAGTATTGAAGAGAAGAGCTGCTTTGCTCTGGGCTCCTTGAATAAGGATCGAATCAGGAAAAGTGCTGATATTCCCACCTGGAACAAGCACTGAGAGATGCATACGTGGTTGATAAACAGCTAGAGCAACAGAAACAACCACATCAAAAACATTTCTGTGGTCTTGCCCTATTCTTGTGTAATAATCAGGCTGGAGAGACTGGGTTTCGAATGAGGATGCTCGCAATCTCCAATGTTCGTAATACGTTTATAGATACATGCAATTGCCAAGCAAGTGTATTCCAGCATAATAGCGTCAAGTTGACagaacagaaaacaaaattttctAAAAGAGACACTGAGATTATGAGAgatgtttaaataaagattcaGACTACTAATTTTGTAGTTGTAATCACGAACCTGCAGTGAAATGAAACTACAAAAAGTGAAGTTTTAATgcgcaattgaaaatttatattgataattgcgcaatagaaattaataaaattattattattattattattattattattattaataattgtaGAGACTTAATGTTCTTCTCAAACATAAATAATATTGTCCATGAAATTAGGTACATGTGAATTCTTTTCACTTGGTAAATAAATGTTCTTATAGGTCATACTTAGTCTTACCACAACTATTGTCTAATAATTTAAGATATTGCTAAGAATGTCGCTTTAAAAGCTTTTTTTGCTTTATATATGTGCTAAATTTAGCCGCATATGCTGTGGAAAATGAGCAAAGACATGCCACTATGTGACGACTTATTTATTGTCATTTGCAGAGAAATATGACTTAGATCTGTGGGATTTGTCAATTTTACTgcaattattttaaaacttatTTGCATTGCAAGCAAACATAGGTAATACTGTCAAAGTTTTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8QFV0	Potassium channel subfamily T member 1 OS=Gallus gallus OX=9031 GN=KCNT1 PE=1 SV=1
Q9Z258	Potassium channel subfamily T member 1 OS=Rattus norvegicus OX=10116 GN=Kcnt1 PE=1 SV=2
Q6ZPR4	Potassium channel subfamily T member 1 OS=Mus musculus OX=10090 GN=Kcnt1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002912 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03493 all species →	BK_channel_a	Calcium-activated BK potassium channel alpha subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003929 all species →	Domain	Calcium-activated potassium channel BK, alpha subunit	Interproscan
IPR047871 all species →	Family	Calcium-activated potassium channel slowpoke-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10027 all species →	CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006813 all species →	Biological Process	potassium ion transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005228 all species →	Molecular Function	intracellular sodium-activated potassium channel activity	Interproscan
GO:0005267 all species →	Molecular Function	potassium channel activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0015271 all species →	Molecular Function	outward rectifier potassium channel activity	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0071805 all species →	Biological Process	potassium ion transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25460	CFAP61; cilia- and flagella-associated protein 61	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.