Detailed information of ENSOFVP00000020052.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_027056105.1, Werner syndrome ATP-dependent helicase-like isoform X1 [Pocillopora damicornis]
Species Cyphastrea salae · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q14191Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Homo sapiens OX=9606 GN=WRN PE=1 SV=2
O93530Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Xenopus laevis OX=8355 GN=wrn PE=1 SV=1
O09053Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Mus musculus OX=10090 GN=Wrn PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000285 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09382
all species →		RQCRQC domainDomainInterproscan
PF14493
all species →		HTH_40Helix-turn-helix domainDomainInterproscan
PF00570
all species →		HRDCHRDC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018982
all species →		DomainRQC domainInterproscan
IPR002121
all species →		DomainHRDC domainInterproscan
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390
all species →		Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR029491
all species →		DomainHelicase Helix-turn-helix domainInterproscan
IPR044876
all species →		Homologous_superfamilyHRDC domain superfamilyInterproscan
IPR010997
all species →		Homologous_superfamilyHRDC-like superfamilyInterproscan

 PANTHER
No PANTHER signature was detected for ENSOFVP00000020052.1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0006260
all species →		Biological ProcessDNA replicationInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0043138
all species →		Molecular Function3'-5' DNA helicase activityInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0044237
all species →		Biological Processobsolete cellular metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOFVP00000020052.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP