Gene detail

Detailed information of ENSOFVP00000020424.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020616146.1, alpha-mannosidase 2x-like isoform X3 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000021976

CTAATTTTTGTCGCCAAAGTTGCTCCTCTGGGTTTGACCACGTACTTTATATCATCAGGCCTTGGATCAAAACTGTGCGAACATTCTAGTATAACAGAGTATAATTCTCCGGAAAATTCTATAAAACCAAGAGCATCACGCATAAGAAGGACGGAGCTGTAACGCAAGTGGCTATCGACTTTGTCTCGTATGGAACAAAACCCTCTGGGGACAGAAGTGGAGCATATCTGTTTATGCCCAATGGGCCTGCTGAGGCTCATGGTCTGGGAGAGCAGCCAGTGGTGTATGTGAGTAAAGGAAAACTGATGCAAGAAGTCCGAGTTGCCCTTCCCAATGTTTTGCACATAGTAAGGCTTTATTCTGTGTCTGGACCTGAAGGAAGAACTGTTGATATCCAAAACCGAGTGGACATACGAGATCAAATAAACAAGGAACTAGTGATGAGAATCAAAAGCAATGTACAGAACAGCGGTCCAGAATTTTACACCGACTTAAATGGATTTCAGATGCAAAAGCGAAAGACTCTGGACAAAATCCCCATTCAAGCCAACTTTTACCCTCTACCGTCTATGGCATTCCTTCAAGACAAGTCCACACGCTTAACACTGCTGTCAGCTCAGTCCAATGGTGTGGCAGGACTGCATCAAGGTGAATTTCAAGTGGTTTTGGATCGTCGTCTTTACCAGGATGACAACAGAGGTTTAGGTCAGGGTGTAACAGATAACAAGCTTACCCCAGCTAACTTCAGACTTGTCGTGGAACGATTTAAAAGTCCACACGAACCTGATGGCATTCCTCTTGCCTACCCCTCACTCCTTGGTCACCGTTTGTTACACCATCTAAACCACCCAGTGTTTACGTTAGTAACTCCGACAGAGTCCGCTGACTCGGCGAACCTGTTGTCAAATTTCAACAGTCTACAGTCTGATCTACCCAATGATATCTTCATGGTTACCTTGCGTTCGATAGCAGATAAACAGCGACCTCGACCCAGCGGCGAGGCTCTGCTGGTAATTCACCGTCTGGGATATGATTGTAATTTTGAATGCAAGTGTCTGGCGACCACAAGCCGTGGACAGGTGAAGTTGAACCATTTATTCAAAGATTTATCGATTGATAAGCTCCAGTCCACCTCTCTGACAATGTTACACGAGTACCAGGAACTTGATCCCAGCTCTCCTCTAAATGTGGATCCAATGGAACTTTATTCATACAAGATGAGGCTCAAGTGATGACGCTTCACGCTGTTTTATACGAAGCGAATTTTATATATGAATGCATACAGTAAATGAAGGATCTTTGCTAAAGAATGTGCTAAATTTTAAAGGAAAACTCGGGTGGTGCTTTACAAACGTTCCGGGGTTTAAAGAAAATGACGCTGATTTATATCTTGTCTTTTAGGTCAGATGATAGTAAGATTCGACTTATACTGCTGGTGACCGAGTTTCTCTTTTAGAGTTCGTAAGCGTAGAGTGTTTATCCGCGAATGCAGAAAGGCTTTTTGAGCGCGTCTCGCCCCATACTCCCTGCCtgatttcgagagaaaaacagtCTGCCAGCAGTCTACAAGTGTCGTACTGGGTTAAATTTCCTAGCTTCGTTAAACTACATTAGAACTACGCTTTACGACACACTCACTAttatatacctcttactaaccgagttcgaggtccgtactggaagttacggaccgagttttttcccctcgatttatggcccaagcgcgaagcgcgcgggccgtaaatcgaaggggaaaaacgaggattcgtaacttacagtacggaccgagaaaacgaggttagtaagatatttattatatctctactgtgtgtctgacgggctcaggaacgatttttATTCAAGCTGAACGtcatcaaatttctgaagcacctcgaaagcaaaatgagtcaatttgaaatcgtttaatacacaatttagagtaaaagaaagatTTAAACTTTCACTTGccataaaagttaagaacaatTTGCGATAAAtcgcaaaacagttttgcaacaaaaccaaccttaaattttagcggtccgtacaggagagtacggcccgctaaattgaccaatc

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P27046	Alpha-mannosidase 2 OS=Mus musculus OX=10090 GN=Man2a1 PE=1 SV=2
P49641	Alpha-mannosidase 2x OS=Homo sapiens OX=9606 GN=MAN2A2 PE=1 SV=3
Q16706	Alpha-mannosidase 2 OS=Homo sapiens OX=9606 GN=MAN2A1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004090 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07748 all species →	Glyco_hydro_38C	Glycosyl hydrolases family 38 C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011682 all species →	Domain	Glycosyl hydrolase family 38, C-terminal	Interproscan
IPR050843 all species →	Family	Glycosyl Hydrolase Family 38	Interproscan
IPR011013 all species →	Homologous_superfamily	Galactose mutarotase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11607 all species →	ALPHA-MANNOSIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004559 all species →	Molecular Function	alpha-mannosidase activity	Interproscan
GO:0006013 all species →	Biological Process	mannose metabolic process	Interproscan
GO:0000139 all species →	Cellular Component	Golgi membrane	Interproscan
GO:0006491 all species →	Biological Process	N-glycan processing	Interproscan
GO:0006517 all species →	Biological Process	protein deglycosylation	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0030246 all species →	Molecular Function	carbohydrate binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000020424.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.