Detailed information of ENSOFVP00000020442.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020624277.1, TPR repeat-containing protein DDB_G0287407-like [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q54KD0TPR repeat-containing protein DDB_G0287407 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0287407 PE=4 SV=1
P97499Telomerase protein component 1 OS=Mus musculus OX=10090 GN=Tep1 PE=1 SV=1
O08653Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007295 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13374
all species →		TPR_10Tetratricopeptide repeatRepeatInterproscan
PF13271
all species →		DUF4062Domain of unknown function (DUF4062)FamilyInterproscan
PF13176
all species →		TPR_7Tetratricopeptide repeatRepeatInterproscan
PF13424
all species →		TPR_12Tetratricopeptide repeatRepeatInterproscan
PF13191
all species →		AAA_16AAA ATPase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR025139
all species →		DomainDomain of unknown function DUF4062Interproscan
IPR051191
all species →		FamilyDDB1-CUL4-associated factor 12Interproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041664
all species →		DomainOrc1-like, AAA ATPase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19860
all species →		DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0080008
all species →		Cellular ComponentCul4-RING E3 ubiquitin ligase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOFVP00000020442.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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