Gene detail

Detailed information of ENSOFVP00000021608.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: CAH3020053.1, unnamed protein product [Porites evermanni]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q05024	Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1
Q08747	Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1
O74503	Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008521 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02201 all species →	SWIB	SWIB/MDM2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036885 all species →	Homologous_superfamily	SWIB/MDM2 domain superfamily	Interproscan
IPR003121 all species →	Domain	SWIB/MDM2 domain	Interproscan
IPR019835 all species →	Domain	SWIB domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13844 all species →	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15223	UAF30, SPP27; upstream activation factor subunit UAF30	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.