Gene detail

Detailed information of ENSOFVP00000022243.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020602141.1, lysosomal alpha-glucosidase-like [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

ENSOFVT00000023958

ctcaatggcaattacTGCACGGTTTTCGTTTTGGCCCTGTCATTGCTCCTAGAGCTCGGAAAGTGCCAGCAGGGATGCAGCGATATTCCAAATAACCGGCGCTTCGATTGTTACCCTGAAGATGGTGCAAGCGAACAGAATTGTTTGAATCGTGGCTGTTGTTGGAGAAAACCTTCGATTGTCAGTAATGAAGTTCCGCTTGATGTACCTTATTGTTTCTATCCCAGTGACTACGGTTATCAGCTGGCGAACAAGGAGAAAACTCAGACAGGATATTTGTTAAGTTTGACAAAGGAAGGGCACGCTGGACCTTATGGCAATGATATCGAAAATTTGGCCGTGGATGTGCGATTTGAATCTCAAGATCGACTTCATTTCAAGTTTTTTCCAGCTGACGTCAAATTTTCTGTGTTTAGGTTCAACAGTTCAGTGGGAGGAATGGTATTTGAGAATCAGTTCATTCAGTTGTCGTCATTACTGCCCTCAAATGTTTTGTATGGTTTGGGTGAACATGTTGTGCCGTTACAACTTGACATTAATTGGTCCAGATCTACATTATTTTCCAGAGACCAGGGAGGCACTCctgagGGTCTTGATAAAAATTTGTATGGTGTTTTCCCATATTATCTGTCAATGGAAAGTGATGGAAATGCTCATGGAATATTTCTTTTGAACAGCAATGCAATGGATATTATTCTGCAGCCTACTCCTGCTATAACATACAGGACCATTGGAGGAATTCTTGACTTCTATGTTTTCCTTGGCCCTACTCCAGATTTAGTTCTCCAGCAGTTTACAGCAGTGGTAGGTCTTCCATACATGCCACCATACTGGGGTCTAGGGTTTCACCTGTGCCGCTGGGGTTATGGAAGTTTAAATGGCACCCAAATAGTGAATGAAAACATGAGAAGGTATGGGATTCCTCAGGACGTCCAGTGGAACGATATTGAATATCTCCATGAACATAAAGACTTTTGGGTTGATGATCTGGATTGGAACGGACTGGGAGACTTTGTGAACAAATTACACGACAGTTACAGTCAGTACTACATTCCAATAGTGGATCCTGGTATATCTTCCCAGCAGGCGTGGGGTTCTTATCCTCCTTTTGATGATGGATATGCAATGGGCATTTTTATCAATGATTCCAATGGTCATCTTATTTTTGGCAAGGTCTGGCCAGGAGATACTGTATTTCCAGACTTTACTTACTCAGAAACCCAAGCTTACTGGGAACAGATGCTATCGCAGTTCCATGAAGAAGTTGAATTTGACGGTCTGTGGATTGACATGAATGAACCGTCCAATTTTGTGGATGGCTCTGAAAAGGGCTGTCCAGCTGATTCACTCCTGGACCACCCACCATACGTGCCCCATGTATCAGGAGGAACGCTATACAGCAAAACACTGTGTATGTCAGCAAAACATCACGACTACTCCCATTATGATGTGCACAGCTTGTATGGTCTGTCGGAAATGGTCCAGACGATGAGCGCTCTgaagaaaatcagaggaaagCGGAGTGTTGTGATTTCACGTTCAACGTTTGCCAGTGCTGGTCGTTATGGAGGACATTGGTTGGGAGATAACGCTGCCACCTTCAACGATTTGTATCTCTCCATACCAGGAATCTTGAACTTCAATTTGTACGGTATTCCTCTGGTTGGACCAGATATCTGTGGCTTTCAAGGCGCTACTAGTAAAGAACTGTGTGCCAGATGGACCCAGTTAGGCGCGTTCTATCCTTTTTCTAGAAACCACAACACAAAGGGCGATCCTgcCCAGGACCCCGCAGCATTTGGAGACGATTTTGCTCGAATGGCACGTGATGTGTTGCTGACCCGCTACAGACTGTTGCCATATTTGTACACTCTTTTTGCGCAGGCGCACACCACAGGAAGTGCTGTAGCCAGGGCTCTTTTCTACGAAAGTTATTCTATGTGGACTGAGTTTACTCTTTTATATCTTGTTCTTTTCAAGGGATCCACTTCAGTAAAAGGCTATTTCCCAGATGCCACATGGTATGACGGTTTGGATGGGTCCATTCTACAAACCTCTGGGGGAGGGGGTCAGTATCACACGCTATCGGCCCCCTGGGATAAAATCAACTTCCATTTTAGAGGAGGACATGTCATTGCGACACAACAGCCAAATATCACCACTTTTTACAGCCGCCAAAATCCATTTGAATTGATCGTTGCATTGTCGTCATCAGGGGAGGCGGAGGGAGGCTTGTTTTATGACGACGGTGAATCACTCGACTTCCTTCACACTTCCAGGTTTTGTTTTGTCGCTAGGGAGGGAACATTGAGTGCAACAGTGGTCAAGAGTTCTTATCAACCTGAGCCACCGCTGACCTACATACACGTGTTTGGCGTCGCGTCGAATCCTACCTCTGTTACAGTAAATGGCTCTCCAATATCCAGCTATAGTTATAATACGACAACCAAGgtGCTGACTATCAGCCAACTCACCTTACCAATGGGCAAAGACTTTATGGTACACTGGTCCTGA

Transcript

ENSOFVT00000023958

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P70699	Lysosomal alpha-glucosidase OS=Mus musculus OX=10090 GN=Gaa PE=1 SV=2
P10253	Lysosomal alpha-glucosidase OS=Homo sapiens OX=9606 GN=GAA PE=1 SV=4
Q6P7A9	Lysosomal alpha-glucosidase OS=Rattus norvegicus OX=10116 GN=Gaa PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001411 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13802 all species →	Gal_mutarotas_2	Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain	Domain	Interproscan
PF01055 all species →	Glyco_hydro_31_2nd	Glycosyl hydrolases family 31 TIM-barrel domain	Domain	Interproscan
PF21365 all species →	Glyco_hydro_31_3rd	Glycosyl hydrolase family 31 C-terminal domain	Domain	Interproscan
PF00088 all species →	Trefoil	Trefoil (P-type) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000519 all species →	Domain	P-type trefoil domain	Interproscan
IPR025887 all species →	Domain	Glycoside hydrolase family 31, N-terminal domain	Interproscan
IPR030458 all species →	Active_site	Glycosyl hydrolases family 31, active site	Interproscan
IPR017957 all species →	Conserved_site	P-type trefoil, conserved site	Interproscan
IPR011013 all species →	Homologous_superfamily	Galactose mutarotase-like domain superfamily	Interproscan
IPR044913 all species →	Homologous_superfamily	P-type trefoil domain superfamily	Interproscan
IPR000322 all species →	Domain	Glycoside hydrolase family 31, TIM barrel domain	Interproscan
IPR013780 all species →	Homologous_superfamily	Glycosyl hydrolase, all-beta	Interproscan
IPR030459 all species →	Conserved_site	Glycosyl hydrolases family 31, conserved site	Interproscan
IPR048395 all species →	Domain	Glycosyl hydrolase family 31, C-terminal domain	Interproscan
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22762 all species →	ALPHA-GLUCOSIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0030246 all species →	Molecular Function	carbohydrate binding	Interproscan
GO:0004553 all species →	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0004558 all species →	Molecular Function	alpha-1,4-glucosidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12316	GAA; lysosomal alpha-glucosidase	EC:3.2.1.20	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.