Gene detail

Detailed information of ENSOFVP00000022279.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020616322.1, methyl-CpG-binding domain protein 5-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000023997

CCGAGGTTTTCCCAAACATTGGCTCATTTGGCAAGTGCTTACACCCCGTTTCTACCAAGGGTTACCGTTCCAGCAAATGCCCCTGTGCAATTTGCTGCACAGAGGATGGTGCCAATGACTGCCATACAGTCACAAACAGGTGGAAATGGACAAATGGGACCAACAGTATTAAACCTTGGAGACTATGCTGTCAAGTACCCATTAAACACAGTAAAACCTGGCTCATACAATTCGCAACCCTCCACTTCAAGTAACGCTGGACCAGCTAACACCCATCCTCAGACGGCTGTTGTTGCTGCAATGCCATATGTCGCATTTGGTCAAATCAACCATCCACGATTTccattttctgtgaattttgcAGCTCCTAGTGTAAGTACAGGTCCTTCTGTTACGTCGTCCTCATCATCACCGGCTTCCAGTCTTGTTACATCTGCAACTACGCCTCACCAATATGGGGCTGGTACTAACACAGATTCCCATGCTACAAGTGCTGTCCTGGGGTATGTTGCTATGCCATTCAATACCAACCACGTGGGCACAGGTCACTCTTTGTCCACCCCTAACCCCCACCCTGGAAGTGCCTTTTCACCTCCTTCTAGCCATGGCATTGCTAGTCATGGTAATCAAAAGATGGATGTACCAAACCTGCCCCATCACCTGCCACCTTGGGTTGCAACCAAGAGTTTACCTGGGGCAACTAATAAACGTAGAGGCAGCACCCCAGATAACAGCAGTTCAGGATGCTGCAGTGTGCAAAATTCGTGTGCATCGTTTTCTGTGTCGTCCAGTAGAAGCAGTTGTATGGAAGTCAGTGCGTCTTCTGCGACTGCTTTGAGAACATCAAGCTCAAGTAGCAGTCAGTCACCTAGACACGCAAGTGTAACGTCCCCCCTGAACTCACCATTACCAATGCCCAGCCAGGGGCTTTCAGGATGTCGTGGGTCACCAAAGGGTGACTCGCCACTGGCAAGTAATAAAGGCAGCGTAGACAGCATGCCTTCTCGTGTTCAGTCATTTAATGCAGTTGAAAGCCATCCGGTGAAAACATCATCTGAAATGGCTTGTACACTAAACAGAACTTACAGTGATGACAATGagcaaacaaaaaagacaaaatacaaTGAGTCAGCATATTATGAAGCTAATCCTCTTCTAGGGCTGAAAAGGTCTTGTGAAGCCATAGAAGCCTATTGCAGTCCGGAGCgagatgatgatgacgatgatgacgatgatgaggaAGATTATATTGATGAACCTGAGGCGCCAAAAAACGAGGGATCTTCCCCTGAAAACAACCAGTCAGGGGAAGGGATTCCGAACAGCAAAAAATGTagcaacttaagcagttgtaaTGAGAATGATGACCGAAGTAGAGGAAACCCCAACTCCAGAAATGAGCGATCTGTTTCCGGTGAGAATGAGCCAATCAGTAACAAGCGCCAGTCTCACTCGCTTTATAATGGGGATGTGTCGCCCAATCAAAATGAGCCCGTACGCGTGCGAACGGTCAACCAGAGCGCATATCCACCAATCAAAACAAATCCCGTAACATCCAACACGATTAATAACCAGGAATGTCGTAACGAGCCGCCCGTGTCCATCGCAAGACCTCAGTTTGATATCGGTGATATTGTTTGGGCGCAGGCTCGTGGTCTGCCTTCTTGGCCTGGTAAAGTGGTGGACGCCAGCGAGGTTGGAAAGGCCAGACCCGATGACGGAAAGcgctGGGTGATGTGGTTTGGTGATCATACATTCAGTCAAGTTGAAGTGGACAGACTCAAAACACTCtccgatggcctaagaacactCGACGATAAAGCTCGCAAGAAAAAATACAAAGCGAAGAAGGCAAGGATTGGCTTAGAGCAGGCCATTAGTGAGGCCTTGGAAGCGCTCGAAATGAGAGAGCGACTTCGAGGGAGACAGGCGGCCAGATCAAAAGCCAAGAAGAAACGCGTTAGATGACGTCGAGAACTGAATGTCAGTAGTGGACGCTTTGATGTGGCGTGCCAGATACCCAGTGGGAATTTGTGGTTATACATTTATATAGATGCAGTAATATATTGCTATAAATACTAAGTAAAATAGAAAGTTATAGGGTATCGTGTAAGTATTTTCACACAAATTACTTTTTATCTAGCCATTTAGCAGGGAGACGATAGTAACTGCTCTTCTCTCACTTGAATTTCTGTGAATTTACATAAATTTAGCTCTTTTTATCACTGTAAAAATCGCCAGCAAAGTTAAAGTAATCACAGAACCATTCACTACAGCCCCTAAGGTAGAACTAACCAATCAGCTCGAAGCAGGAAAAGCTTGCCTCCGTCAAGGGCGGGAAAACGTGTAGCCGGCTAAAAACGCGGGAAATCCAGTGAGCCAAAATATTGTTTCGcgcctgattggctgagaagatGGCGTattcgctctgattggttaaacgATGCTGCACGAGTTTCCTGAACAGAGCGCGAAACGAAAGAAGAAAGTTTTAGATGGGATTATTTCATGGCCAGAAAACCAGGTTCTCTACATGACTGGTGGCTCGGCGAGCAGTCATTAGGAAGGTT

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006077 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00855 all species →	PWWP	PWWP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000313 all species →	Domain	PWWP domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16112 all species →	METHYL-CPG BINDING PROTEIN, DROSOPHILA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0010369 all species →	Cellular Component	chromocenter	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000022279.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.