Gene detail

Detailed information of ENSOFVP00000022355.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: CAH3147425.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000024081

TGCCACTTCGTCCATTTACTTCAGATTCCAAAGTTTTTTCTTGATCGAAATGGCGGAAAGCAAAGAGCAAGAAAAGCCCTACAAAGAACCTGCAGTCCGTGCGCCAAGCCTTTCAAAGCTATCTGAAATCGCTAAAAGCCTGGGATTAGACATTGAAGGGAGTGAGCTGATGGCTTACCGAGAGGCTATTTCTGGCACTTTGACTGATACCTATCAGCGACTGTACGAGTTACCAGATCCCAAGCTACCAGTGAAATATCCACGGACACCAGGTTACAGGCCAGCACTGGAAGATAACCCTTACAATGCTTGGTACTGGCGCTGTGATATCAAAGGAGCATCAAATGGCAAACTTCTGGGCAAGACAGTGGCCATTAAGGATAACACGTGTGTGGCAGGAGTACCAATGATGAATGGCTCCCTCATCTTAGAAGGGTTTGTCCCGGATGTTGATGCCACAGTGGTGTCCCGGATATTGGACGCAGGTGGAAACATAATCGGCAAGAGTGTCTGCGAGAATTTGTGCTGCAGCGGCGGAAGTTTCACTGCTGCTACGGGACCTTTGCTGAATCCACACAATAGCACAAGAATGGCTGGAGGGTCGTCTTCGGGATCTGCGGCTTTGGTGGCCGGTGGCAAGGTTGACATGGCCACTGGTGGAGACCAAGGAGGCTCCATAAGGATTCCTTCCGCTTCGTGTGGCATTGTGGGACTGAAACCTACATACGGGCTAGTGCCGTATACGGGCATCATGCCTATAGAGTTCACTCTGGATCATACGGGACCTATGACCAGGACTGTTCAGGATGCAGCTCTAATGTTGGAGGTTATGGCAGGATATGATGATGGACTGGATCCAAGACAGCCAagggatcttaaagtccctgaaTATACTTCACTGCTCACAGGAAAGATAGAAAACATGAAGATCGGAATTTTACAAGAAGGGTTTGGTTTGGGGAATTCAGAAGCGGACGTTGATAAGATGGTCAAGGAAGCGGCTGAACAGCTGGGCAGTAAATGCGGCGCAGTTGTGGAGGAAGTATCGATACCAATGCATTCTGATGGTCCGAAGGTGTTTGGACCTATCTTGCAGATTGGAGCAAATCGAATGATGTTGGACGGAGCTGGTTTTGGGACCTCTGCCGAGATGTACTACGACACGACTCTACAAGAAGCCGTTTCTCGAGGCCTGAAATGCCACTCAAACGATCTGTCAAAAAGCGTCAAATTCGTCAAGTTGATATCAAAGTATTTACAAGAGGAGTACAACGACATATTCTACGGAAAGGCGCAGAATCTGGGGCGAGTGCTTTGTAAGGCGTACGACGAGGCACTCCAAAAATATGATGTGTTGATTCTACCAACCCTTCCCAAGAAGGCACCAGCCTTCCCGCCAGAAAATTCTCCCTTGGAAGAGTATTTAGAAAGGGCATTTGAAATGGTGGTGAACTGTTCACCGTTTAACGTTACAGGCCACCCAGCGCTGTCAATCAACGCGGGGTTCAGTGATGGCTTACCAGTTGGTATGATGATTGTGGGAAGAAAGTTTGACGAAGCCACTGTTCTGAATGTCGCCTATGCTTACGAGAAGATCAGGGATGCTAAAAAATAAACGTAAAAAGACATGTTTAGTAGCAGAGAGGAAGCTATAACGCTACTCAAAAGTTATCATTACTTTCGTTGTAATCATTAAATGATTTCTTCTGGTATATagaatttgaagaaaagaaagaagagttGTCAACATAAGTTCCTCATACGCTAGGTTTGACAAAAAAGCTCGCGACACGATTAATCTCACCTCCACTTAGATAGTGCTTCATGACTGTTTGACATCTCACTGTTCAGTCAGCTTCCATCAGGTTTAAAAGAACAGTAGTACCGCAATAGGTTATGAAGTCCTACTTGGTATAAGATTGATTTATGGAGCCACTCGTACAATGCAAATAAAAGTATGCATTCTTACTCGACGAGGAATGCCAGTCTACT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P95896	Amidase OS=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=SSO2122 PE=1 SV=1
P27765	Amidase OS=Pseudomonas chlororaphis OX=333 PE=1 SV=3
P22984	Amidase OS=Rhodococcus erythropolis OX=1833 GN=amdA PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000882 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01425 all species →	Amidase	Amidase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020556 all species →	Conserved_site	Amidase, conserved site	Interproscan
IPR036928 all species →	Homologous_superfamily	Amidase signature (AS) superfamily	Interproscan
IPR000120 all species →	Family	Amidase	Interproscan
IPR023631 all species →	Domain	Amidase signature domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11895 all species →	TRANSAMIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01426	E3.5.1.4, amiE; amidase	EC:3.5.1.4	Styrene degradation	ko00643	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.