Detailed information of ENSOFVP00000022381.1 in Cyphastrea salae

Genomic Location: chr3:42850316...42851551
NR annotation: XP_020614333.1, hematopoietically-expressed homeobox protein Hhex-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q03014Hematopoietically-expressed homeobox protein HHEX OS=Homo sapiens OX=9606 GN=HHEX PE=1 SV=1
P43120Hematopoietically-expressed homeobox protein Hhex OS=Mus musculus OX=10090 GN=Hhex PE=1 SV=1
Q05502Hematopoietically-expressed homeobox protein HHEX OS=Gallus gallus OX=9031 GN=HHEX PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008727 (this species only) · gene tree & orthology
Transcription factor familyHomeobox · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046
all species →
HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017970
all species →
Conserved_siteHomeobox, conserved siteInterproscan
IPR001356
all species →
DomainHomeobox domainInterproscan
IPR051000
all species →
FamilyHomeobox DNA-bindingInterproscan
IPR009057
all species →
Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR020479
all species →
DomainHomeobox domain, metazoaInterproscan
IPR000047
all species →
Conserved_siteHelix-turn-helix motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24324
all species →
HOMEOBOX PROTEIN HHEXInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355
all species →
Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0000978
all species →
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154
all species →
Biological Processcell differentiationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOFVP00000022381.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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