Gene detail

Detailed information of ENSOFVP00000023120.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: DAC81289.1, TPA_asm: PolB [Corynactis coral adintovirus]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

ENSOFVT00000024941

ATGAAtgtAATAAATAACGAAGACCCCCttaaacaattacaaaacacaagaaaagcagttgagtatcacataATGAAGATACTAaaatccatgaaaggtttgaaattcgttGAAACACTTGAAGTGATATTCGAAAAAAATGTGAGTGGTGAAATAGTGTATAAAACAGCTTACTTCAACagtaaacctcaaaccatcacaAATGACGAgcaaatccctgaagcgttacaattatcacaacagcagatactcAACATAATCACTAAATGGTTATCTAATGGTTCTGGTTCgactattgaatccgttaaCAGTCATcatcttaatattgtacaatatcaaccaatgaaaggctcttcatatttTATGCTTCCACCTGAACTAAGAAACAGTAAAAAAGGATTAATCAACATGAAAAATAAGgataatgaatgcttcagatggtgccaCATAAGACATTTAAATCCACAAGACAAAGATCCACAGAGGATTAAAAAATCAGACAAGGCATACATTAAAAATTTGGATTATTCAGaaattgaattcccagtaaccacaaagcagtacaataaaattgaaaagcaaaatgagatcaacATCAATGTAttcggatatgaaaacaaacaaccatatcccatttatgtgtcaaaagaaaaatatgacaatcacatgaatttattattgataactgaaaatgaGAATAAACATTATGCGCttatcaaagatttcaacaggTTCATGTTCAACCAAACAAAGTATGAAGGAAAGAAacacttctgcatgcattgtcttcagtgtttaagctctgaaagagtcttgaataATCACAAAGATAATTGTATTCAAGTGAATGGAacacaagcagttaaaatgcctgataaaGATAACAATATATTagaattcaacaacttccataaacagcagcctgtgccatttgtgatctatgctgactttgaggctataacagaaaagatatctgattgtcaacctaataataacaaatcatatacagaggcatatcaaaaacatacagactgtggatacggctataagattgtttgttgctatgatgataaatatagcaaacctgtaacaatatacagaggtaaaaaggctgtgtataaattcatggaagctatgctggaggaagtcaaatattgtaagaaaataatgaaaaaagaattcaataaaccattgagaatgacaaaagaagatgaagaggaatttcaaaaagccaatgaatgtcatatttgcaataaaaaatataccaatgaagatattaaagttcgagatcactgtcatatcactggcaaatataggggttcagcccatcaagaatgtaatctaaaactcagagtaaaaccagaagaaataaaaatacctgtcatattccataatctaagaggttatgacagtcatttcataatgcaagagattggtgaaatagttaagaagcatacatacataaataaaaatggaaaagagacgcagatgaatattaatgccattcctaacaacatggagaagtatatggctttcatgcttgGTAATCACTTAATGTtccttgatagtttccaattcatgagctccgGTTTGGAAaaactagtgagtaatctaccaataaaatcattaaagtatacctctcaaaaattcaaaggtaaaaagtttgatctgatggctagaaaaggagtatacccttacgactatatcgACAGTTTCGATAAATTCAGTGAAAAGCTTCCAGcaaaagaagaattttacagcGTACTaaacaatgaacatatatcagatgaAGACTATAAACATGCTAAAACTGTGTGGGATATATTTTCTctaaaaaatatgggtgattatcataacctttatctaaaatctgatgtacttttattagctgatgtatttgaaaacttcagaaaaacatgtcttgaatattacaaacttgatccatgccattatttcacatctcctggtttgtcatgggatgctatgttgaatatgactgacattaaactagagcttatgactgatattgatatgtttcaatttattgaaaagggcttgcgtggtggaatcagctatatagccaatcgttatgggaaagcaaacaataaatacatgaaagaatacaatgagaaggcgccctcaaagtatatcatgtatcttgatgctaataacctttatggttgggctatgagtcagtatttaccaacaggcggattcagatggatgacacaaaaacagattgataagatagatcttgctaagtacaaagaagataataataaaggttttatagctgaagtCGATTTTGAATAtcctgaagagttacatgatcttcataatgactatccacttgCTCCAGAAAAGATAAATGTTGATAAATACAATCTGTCTGAATACTGTAAAAGAATCAGTGAAAAATACGGAATATCAACTGGTTTGGTAAgtaaattaataccaacacttggtaaaaaagaaaaatatgttttacattATAGAAAGTTGCAATTATATATAGATCTTGGCCTCAAAGTAACTAATGTTCATCGTGTTCTTGAGTTTaatcaatctccttggttgaagcaatatattgattttaatacagaaaaaagacagaatgccaagaatgctttcgagaaagattTTTTCAAGCTTATGAACAACAGTGtatttggtaaaacaatggaaaatataagaaagcgagtagatgtaagattggtaactgatgagaagaaactattgaaatatgccagtaagccaacttatgttagtagtaagatcttcaatgaaaatctagtagctgtgcataagatcaaagaaacacttactctaaatAGACCTGCATATTTAGGAATGTGTATCTTAGATCTCAGTAAGACAttaatgtatgatttccattataactacattaaaaataagtatggagaaaaagcaaagctactattcacagacacagacagcttgacatatgaaattgaagctgaagatgtataccaagacttttgggatgataaaaataaattcgataatagtgactatccagaaagctctccatattttgataagaccaataagaaagtaattggtaaattcaaagatgaagctgctggagttcccatttgtgaatttgttggtttgcggtctaagatgtatagctatattaaagataaccaaaaaggaggtaagaccgctaaaggtataaaaaagaatgtcattaaaaaagacattcaacatgaaaactataaagaaacactcttcaataataaacagatgtatcataagatgaaaacaattagaagtgagagtcatcaacttggtagttgtgaaatcaataaagtatcactaagctgtttcgatgataaaagatatattctcgATGATGGAAAGACAAGTTATGCATATGGTcataaaaatattcaacaaaaaatatataaaaattttctatgttaa

Transcript

ENSOFVT00000024941

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000017 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02945 all species →	Endonuclease_7	Recombination endonuclease VII	Domain	Interproscan
PF03175 all species →	DNA_pol_B_2	DNA polymerase type B, organellar and viral	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR004211 all species →	Family	Recombination endonuclease VII	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR038563 all species →	Homologous_superfamily	Recombination endonuclease VII superfamily	Interproscan
IPR004868 all species →	Domain	DNA-directed DNA polymerase, family B, mitochondria/virus	Interproscan
IPR044925 all species →	Homologous_superfamily	His-Me finger superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31511 all species →	PROTEIN CBG23764	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003887 all species →	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0006260 all species →	Biological Process	DNA replication	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000023120.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.