Gene detail

Detailed information of ENSOFVP00000023449.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020617069.1, tubulin polyglutamylase TTLL4-like [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

Sequence

CDS

ENSOFVT00000025340

ATGAATTCAAGGGCACAGCTAGAGAAAGCTTTGTCCTCCAGGCTCAACGGGGTTCAAATAACCGATCAATTATGCAGGCTATCAAGGGAAAAAGCACCTCCACCTGTTCTGAAAACTAATTCCATAGCGCCACAAAAATCGTTCAAGTTTCTACCCCACCCGCCTCAAAACCAGAGAACATCTGGAAGCCAGGTTCATGGTAATGCAAGAACTGAAAGCAAAAATGTGAAGCCAGTACCCCCTTCTGAACCTCGGTCAAAGAAATCAGTAGTGAGGAAGTTTTATGATGTAAAGAAGCAGGACAGTTTCGTTGATGAAGGAAGAATAAGTGGAGATGGAGAATCACTGGAAAACGAAGAGTACCAGGAGAAATCAAGGTGTCCATCGTGGGAGCGAATTCCAGGAGATGGCTGTATTTCAGATATTGCTGAAGAGGATGAAGGcgtggaagaagaagaagatgatgaCATGGACaaaattgatgatgatgatgacaacaaTGACTTTAATGAGGGAAACATTGATGAAGATATCTATGAATGTGATGAGCTAGAtgaagCGGGCTTCTCAGATAATGATgacgaagatgatgatgatggctcTCAGTCAATGATCAGCACGGCTGCTTCATCTCGTGTTTCTACAGCTAAAAGCAGAGCATCAAGTGCAAGATTAACTTCTGTTAACAGATGGTCTGGTACAGTAGGCTCCTCAAAACCATGTTCATCTGCGTCATCAAAAAAGACCAATGCTTGGGTATCAACTGACAatgaaaaacaagagaaagctcCACCCTTGGTACCCAGTTTATTTGCCCATGTGCCATCAACCATTTACTTTTTTGTGGAGGGTGAAAAAGTTGCTCAACTTTCTCCTGAACTGCGAAAACTTCTCAGATGGAAGATGACTGCCATAACACCGAATGTAATCAAGCAGTGTATTGCAAGAGTTGGCTTCAAACCAACCAAGAGAAATGACTGGTTAGGTTACTGGGGAAAGCACATGAAAGCGAATTGTTTCAAAGCTGTAAGGGAGTATCAGAAGGTTAATCATTTTCCTGGTACATTTCAAATTGGGAGAAAGGACCGCTTATGGAGAAATCTGTCCAGAATGATGGTTCACCATGGGAAGAAGGATTATGGCTTTGTTCCTCAAACATACGTTCTTCCTTATGACTTCAAACTGCTTAAGAGAACCTGGGATGATGGTGGCAGTCGACAGAAGTGGATTCTTAAGCCGCCTGCATCAGCTAGAGGTATCGGAATCCGTGTGATCCATAAGTGGAATCAGATTCCGAGGAAGAGGCCAGTGATTGTGCAAAGATACCTTGCAAAGCCATTTCTCATCAATGGCAGCAAATTTGATCTCCGTATCTATGTCTACCTCACTTCATATGACCCTCTAAGAATTTATGTCTTTGAAGATGGGCTTGTGAGATTTGCTACATGCAAGTATTCATCTTCTATGAAGAGTTTAAGCAACAAGTTTATGCATCTGACAAATTACAGCATCAACAAGAAGAATGAAGGAGCATACCAAGCGAACTCAGATGAAACTGTTTGTCAGGGTCACAAATGGAGTTTGAAAGCTCTTTGGGGTTATATGAAACGTATTAACATCAATCACGCTCATGTATGGGAGACAATCAAGGACCTGGTTGTCAAAGCCATCATAGCGTCTGATTCATCAGTTAACACTATGGTGAAGCAAAATGTGAGAAAAAGATCCTGCTGTCACGAGCTATTTGGGTTTGATGTCATGTTGGATGAAAATCTTAAACCTTGGCTCTTGGAAGTGAATATCTCACCAAGTCTTCATTCCACATCTCAACTGGATCGTAACATCAAGGGTCAGATGATCAAGGACTTGTTGAACCTGGCTGGGTTTTGCATTCCAGAAAACTTGATCACAACTTCAACTTCAAGTACAAGCAACATGAACCAGTTTGTCCAGGACAAGGGAGTGCCAGGTCTTTCTGCAGATGAAAGAGCTAAGcATGCATTTTATGTTCAGCGTCATTTGGATGAGCGCACCAAGCAGTCAGTCCTGGACATTTTGACCCCAGATGACATAAGAATGTTGATGGAAACTGAAGATGAGAACAGTAGAAGAGGATGTTTCCAACGAGTTTTTCCATCACTCTCATCTAACAAGTATTTAAGATTTTTTGAGTCACAGCGATACTACAACATCTTGCTGGATGAATGGACGAGAAAATACATGAGAGAGGGACGCAGTACAGCATTAGGTGTAGCTGTTCTTCAGGGATATGCTGAAAAGAAACTTCACCTTGGGTCAACATCAGATCCTGCCCATCAGTGGACATGTCCTCAGGGTATGACATACAGATCCTCGTCAGCTCCAGTTCTTGGTTTGGGCCATGGACTTGTCAAATCAAGTGCATCGGCACCAGTGCTCTTACCGAAGATCAAAAGGAAGTCAACCAAATCGCACACATACAAGGTGTCTTCCAATTCGGCGGCATCCTCTGAAAGAACGAAGCAGATGCTGAGAACACGAATGAAATCGAATATATGA

Transcript

ENSOFVT00000025340

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q14679	Tubulin monoglutamylase TTLL4 OS=Homo sapiens OX=9606 GN=TTLL4 PE=1 SV=2
Q80UG8	Tubulin monoglutamylase TTLL4 OS=Mus musculus OX=10090 GN=Ttll4 PE=1 SV=3
A8X9V4	Tubulin polyglutamylase ttll-4 OS=Caenorhabditis briggsae OX=6238 GN=ttll-4 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005127 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03133 all species →	TTL	Tubulin-tyrosine ligase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004344 all species →	Family	Tubulin-tyrosine ligase/Tubulin polyglutamylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12241 all species →	TUBULIN POLYGLUTAMYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0036211 all species →	Biological Process	protein modification process	Interproscan
GO:0000226 all species →	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0005929 all species →	Cellular Component	cilium	Interproscan
GO:0015631 all species →	Molecular Function	tubulin binding	Interproscan
GO:0018095 all species →	Biological Process	protein polyglutamylation	Interproscan
GO:0070740 all species →	Molecular Function	tubulin-glutamic acid ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16601	TTLL4; tubulin polyglutamylase TTLL4	EC:6.3.2.62	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.