Gene detail

Detailed information of ENSOFVP00000023456.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020610802.1, ubiquitin thioesterase zranb1-B-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

ENSOFVT00000025346

ATGccaaagaaagaagaaagtttGAAATGGGCGTGCAAGTATTGCACATATTCTAATTGGCCTTGTTCTATAAAATGTACTCTGTGCTACGCTCCAAGGCCGCCGCAGGTAATCACGCAAGAAGCGAGTAGACCGACAGGCGTAACAGAAGATATTTACGAGGCAGCTAGCAGCGACAGGATTATCTCTACTGACCCGATTATTTGCTCGTCGAGCGACAAGAAAACGCTGTCTCCACGACACGCCGAACAGactgaagaaaattcaaaatggaCGTGTTCATGTTGTACATACGAAAACTGGCCTCGATCGCTCCACTGCGCCATGTGCCGGGCGTCGAAGCACAAATCAGCCAAGAATGGGAGACACATAGACCCAGGAAATGGGAACAAGGATACCTCTTCTCGAAGCGTTTCTCCAAAATCACCGGGTTCTGTTGGTAACTACGGAAGGCTTGATtccaaaacaataaacaatGATAAGAATCGCGCGCTGTTAAAAAATCACAAGTGGACATGTCCACAATGTACTTatgaaaattggccaaaaacTACCAAATGTGTACTTTGTAAGTGTTTGAAACcagccaaaacaaaacaagaagagATCGTGAAGAATACAGGGCTAGATAATAATGCAAAAAGACCATCTACGTCAAAAAGGAGGTCTCCCCCTTCATCAGTCAGTGAGGCCACTTTAGAAATACAACCAAGCAGTCAAACTGGGGAAAAGATCATTTACGACATCCCAGCCTCGGATGACGTCAATGATAATGAGGAGGTGCTGCAAATTCGTAATCGTCTACAGGATTCGGATTGGTTGTGGTTGAGTGCTTGTATAGGTGTCGTAGAAGGTGATGTTTCATCAGTGGAGAGCTATTTAAACTCTGTCAGTGACCTTTCCAGACAGTTGACGAGAGAAGACTGTTTGGTGTTGAACCGACCGGGAGTCTTTGAAGTAGGACATACACTAGTTCACTTGgcatttaaatttaagagaGATGAACTCATGACTATACTGCTTACTCCAGAAGTGACAAGCCATCATTTAAGACGGGTTCCTTGCATTGCTTGCCCAGAACTAGCAGCAGACATAAGGAAACAAATGGGTCACACCATCAGGCAACGTAAAGGTGACTGGCGCTGTTACTTTTTCACTGACCAGGTCACATTTGTTTTACCAGCAGATGTCCAGGACTTTCCAACAAGAGTACAGAGGCAAGTGTTTGATGATATTCTTGACAGGGATGTTCAAAGAGttTTAGAAATGGAGTCTCCTGTTATCAACTGGAGTGAAGAGATCACAGAACAGCTAGGCAGTAGGATCTATCCCTTGTGGAATCGTTCTGCTGGAGATTGTCTTCTAGACTCAGTTCTTCAGGCATCATATGGTGTATTTGATAGGGATAACACATTAAGAAGAGCACTGTATGACAGTTTAACTGAAGGAGGCTCAAGGTTTTTCAACAGGTATAAGGAGTGGGAATCAATGCAGGCGGAAACGCTACAGTACTCACTGGATGAAGACCAGTGGGAACAAGACTGGGCTTCCATTCTCAGTCTTGCTGGTCAGCCTGGTACATCCTTGGAACAGACACACGTGTTTGCTTTGGCACACATTCTCCGCAGACCTGTCATTATCTACGGTGTGAAATATGTCAAGAGTTTTAGAGGAGAGGTGCTTGGGCTTGCTAGGTTTCAAGGTGTTTATCTTCCTGTTTTATGGGAACAAAGTTTCTGCTGGAAAAATCCATTAGTGCTGGGCTACACCAGAGGACATTTCTCTGCCTTAGTTGCTATGGAAACAGACAATTCTAACGAGCTTGGTGCGGGAGCTAATGTGGATAGTATTGATAGTGTTCATGTGACTTATCTGCCACTGGTTGACTATGAAGGCAAACTGCTACCTGTGCACTTTCTGTCAGCAGAAGAGAGGGGCAGTGAAGAGCGTTTGTTGCGTGAGTGGCTAGACTGTTGCGTGACAGAAGGTGGGGTCCTTGTGGCACAACAGAAGGTTACACCAAGACCTGCATTACTCAATCAACTGATTGATGACTGGTTAGATCGTTACAGGAAGCTCAGCAAAACAAAGTGA

Transcript

ENSOFVT00000025346

TTGATGAACCCGGGAAAGTATTCGCCGATTTTTTCCCGTGAACGTCATAAAGGAACCTCGGCCGAGCATGAAAATCAGCTTCATGACACCTAAAGTACTTAGTAAAAGACGTTTGGCCGGAGCTTTCGGTGTTGAAGGCCCGAGAGCTCGACGAAATAGTGAACCGAGATTGGTACAGCTTCTGGGATCTTTCGCGGAAGGTGTTGTTAGGAGAAGACGGTATTTGTTGAATTGTGAGGACTTAAGACATTCACTTCGTTCTATAAGAACTTTTACTTCATTATTAGATTATTTTCATCATGccaaagaaagaagaaagtttGAAATGGGCGTGCAAGTATTGCACATATTCTAATTGGCCTTGTTCTATAAAATGTACTCTGTGCTACGCTCCAAGGCCGCCGCAGGTAATCACGCAAGAAGCGAGTAGACCGACAGGCGTAACAGAAGATATTTACGAGGCAGCTAGCAGCGACAGGATTATCTCTACTGACCCGATTATTTGCTCGTCGAGCGACAAGAAAACGCTGTCTCCACGACACGCCGAACAGactgaagaaaattcaaaatggaCGTGTTCATGTTGTACATACGAAAACTGGCCTCGATCGCTCCACTGCGCCATGTGCCGGGCGTCGAAGCACAAATCAGCCAAGAATGGGAGACACATAGACCCAGGAAATGGGAACAAGGATACCTCTTCTCGAAGCGTTTCTCCAAAATCACCGGGTTCTGTTGGTAACTACGGAAGGCTTGATtccaaaacaataaacaatGATAAGAATCGCGCGCTGTTAAAAAATCACAAGTGGACATGTCCACAATGTACTTatgaaaattggccaaaaacTACCAAATGTGTACTTTGTAAGTGTTTGAAACcagccaaaacaaaacaagaagagATCGTGAAGAATACAGGGCTAGATAATAATGCAAAAAGACCATCTACGTCAAAAAGGAGGTCTCCCCCTTCATCAGTCAGTGAGGCCACTTTAGAAATACAACCAAGCAGTCAAACTGGGGAAAAGATCATTTACGACATCCCAGCCTCGGATGACGTCAATGATAATGAGGAGGTGCTGCAAATTCGTAATCGTCTACAGGATTCGGATTGGTTGTGGTTGAGTGCTTGTATAGGTGTCGTAGAAGGTGATGTTTCATCAGTGGAGAGCTATTTAAACTCTGTCAGTGACCTTTCCAGACAGTTGACGAGAGAAGACTGTTTGGTGTTGAACCGACCGGGAGTCTTTGAAGTAGGACATACACTAGTTCACTTGgcatttaaatttaagagaGATGAACTCATGACTATACTGCTTACTCCAGAAGTGACAAGCCATCATTTAAGACGGGTTCCTTGCATTGCTTGCCCAGAACTAGCAGCAGACATAAGGAAACAAATGGGTCACACCATCAGGCAACGTAAAGGTGACTGGCGCTGTTACTTTTTCACTGACCAGGTCACATTTGTTTTACCAGCAGATGTCCAGGACTTTCCAACAAGAGTACAGAGGCAAGTGTTTGATGATATTCTTGACAGGGATGTTCAAAGAGttTTAGAAATGGAGTCTCCTGTTATCAACTGGAGTGAAGAGATCACAGAACAGCTAGGCAGTAGGATCTATCCCTTGTGGAATCGTTCTGCTGGAGATTGTCTTCTAGACTCAGTTCTTCAGGCATCATATGGTGTATTTGATAGGGATAACACATTAAGAAGAGCACTGTATGACAGTTTAACTGAAGGAGGCTCAAGGTTTTTCAACAGGTATAAGGAGTGGGAATCAATGCAGGCGGAAACGCTACAGTACTCACTGGATGAAGACCAGTGGGAACAAGACTGGGCTTCCATTCTCAGTCTTGCTGGTCAGCCTGGTACATCCTTGGAACAGACACACGTGTTTGCTTTGGCACACATTCTCCGCAGACCTGTCATTATCTACGGTGTGAAATATGTCAAGAGTTTTAGAGGAGAGGTGCTTGGGCTTGCTAGGTTTCAAGGTGTTTATCTTCCTGTTTTATGGGAACAAAGTTTCTGCTGGAAAAATCCATTAGTGCTGGGCTACACCAGAGGACATTTCTCTGCCTTAGTTGCTATGGAAACAGACAATTCTAACGAGCTTGGTGCGGGAGCTAATGTGGATAGTATTGATAGTGTTCATGTGACTTATCTGCCACTGGTTGACTATGAAGGCAAACTGCTACCTGTGCACTTTCTGTCAGCAGAAGAGAGGGGCAGTGAAGAGCGTTTGTTGCGTGAGTGGCTAGACTGTTGCGTGACAGAAGGTGGGGTCCTTGTGGCACAACAGAAGGTTACACCAAGACCTGCATTACTCAATCAACTGATTGATGACTGGTTAGATCGTTACAGGAAGCTCAGCAAAACAAAGTGATGTTTATGTTAGATTGTCAGATACAACATGTGCTAACAATATCATATATTATGCACACATAGTGTTGAATTGCAGTCGCTTAATTTGTACCTGCACAATGACTGAAGCGCTATATTAGTAGTCATTTTCAATGGTCTGTAGCAAGGAAAGGGGATCCAGTCATCTTTTGCAGGAATTCAAAGTCGCTGTAATCAAAGGTCAATGTGACCTCAAATTTTGCCTTTCGTTTACTTCTTGAAATTTTAATCCAAATGACATCAACTACAAGGCCATTTTGTCCACCTACCCTTTCCTGAGTCGTCTTTTGCTATGGAGCTCCTTCATTCACTCGCTTGTGTGAATCTGTTTACAGCCCTCATGTTTTTTGTACATGTTAACTACAATCACACTGAACTGTTTCTGCATTTTAGTGATAGAGTGTAAATAGAACAAAGTCCACTTCAAGAGGATTTTGcatgaaattatattttggttCTGTGGTTAAATGGGAGACCCATTGTGACACTACAGATTATTATAGAACTTAGACAAATCGGTTCTGGTATGCACATTTGAAACGTTTAAATTGAAACACTGAACTCTACTTTTGGTTCATTAACTGGACTTCTTTTGTGAATTAGAGGCTTAAATAAATTGGACACTAGCACTTAGTGAGTTTCTGGTAACACTTCTTTTTTCGCAGCCTGCTTTGCCCTTCTTTTTTTGTACCCAACTTCTTTAGACTCCATTAGAAATGTTTGTAAACATGTTTGTTACAGAGTCGTTCTTTGACTAGGCACAGAATATCTTACATGATTAGGGTTTAATAATCAAATCATTAAAAtagtttatgttttaaaatcccaatataattattataattaatatTGCAACTTCATtatttaaagttgttttgaaGTTTAGACCATATTTTGTATTTGGCAACCCTACTTCTGTTAGTTGTCCAGCTAATATGATGTTAATAGTGACTGAACAATATCTTATTGTCGGAATTTTTGG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NUB7	Ubiquitin thioesterase zranb1-B OS=Xenopus laevis OX=8355 GN=zranb1-b PE=2 SV=1
Q5U595	Ubiquitin thioesterase zranb1-A OS=Xenopus laevis OX=8355 GN=zranb1-a PE=2 SV=1
B1H2Q2	Ubiquitin thioesterase zranb1 OS=Xenopus tropicalis OX=8364 GN=zranb1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009098 (this species only)
Ubiquitin family	UBD\|ZnF\|NZF · all ubiquitin genes in this species
Ubiquitin family	DUB\|OTU\|OTU · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02338 all species →	OTU	OTU-like cysteine protease	Family	Interproscan
PF18418 all species →	AnkUBD	Ankyrin ubiquitin-binding domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001876 all species →	Domain	Zinc finger, RanBP2-type	Interproscan
IPR049768 all species →	Domain	Ubiquitin thioesterase ZRANB1, ovarian tumor domain	Interproscan
IPR051346 all species →	Family	OTU Domain-Containing Deubiquitinase	Interproscan
IPR003323 all species →	Domain	OTU domain	Interproscan
IPR041294 all species →	Domain	Ankyrin ubiquitin-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13367 all species →	UBIQUITIN THIOESTERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004843 all species →	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0070530 all species →	Molecular Function	K63-linked polyubiquitin modification-dependent protein binding	Interproscan
GO:0071947 all species →	Biological Process	protein deubiquitination involved in ubiquitin-dependent protein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11862	ZRANB1, TRABID; ubiquitin thioesterase ZRANB1	EC:3.4.19.12	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.