Detailed information of ENSOFVP00000023475.1 in Cyphastrea salae

Genomic Location: chr5:28022784...28023785
NR annotation: XP_020607064.1, transforming growth factor beta-1-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P27090Transforming growth factor beta-2 proprotein OS=Mus musculus OX=10090 GN=Tgfb2 PE=1 SV=2
P17246Transforming growth factor beta-1 proprotein OS=Rattus norvegicus OX=10116 GN=Tgfb1 PE=1 SV=1
P04202Transforming growth factor beta-1 proprotein OS=Mus musculus OX=10090 GN=Tgfb1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010870 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00019
all species →		TGF_betaTransforming growth factor beta like domainDomainInterproscan
PF00688
all species →		TGFb_propeptideTGF-beta propeptideFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017948
all species →		Conserved_siteTransforming growth factor beta, conserved siteInterproscan
IPR001839
all species →		DomainTransforming growth factor-beta, C-terminalInterproscan
IPR029034
all species →		Homologous_superfamilyCystine-knot cytokineInterproscan
IPR001111
all species →		DomainTGF-beta, propeptideInterproscan
IPR015615
all species →		FamilyTransforming growth factor-beta-relatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11848
all species →		TGF-BETA FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008083
all species →		Molecular Functiongrowth factor activityInterproscan
GO:0005125
all species →		Molecular Functioncytokine activityInterproscan
GO:0005576
all species →		Cellular Componentextracellular regionInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan
GO:0007179
all species →		Biological Processtransforming growth factor beta receptor signaling pathwayInterproscan
GO:0042127
all species →		Biological Processregulation of cell population proliferationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOFVP00000023475.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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