Detailed information of ENSOFVP00000023480.1 in Cyphastrea salae

Genomic Location: chr5:28021960...28023785
NR annotation: XP_020607064.1, transforming growth factor beta-1-like [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P27090Transforming growth factor beta-2 proprotein OS=Mus musculus OX=10090 GN=Tgfb2 PE=1 SV=2
P61811Transforming growth factor beta-2 proprotein OS=Chlorocebus aethiops OX=9534 GN=TGFB2 PE=2 SV=1
P61812Transforming growth factor beta-2 proprotein OS=Homo sapiens OX=9606 GN=TGFB2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010870 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00019
all species →		TGF_betaTransforming growth factor beta like domainDomainInterproscan
PF00688
all species →		TGFb_propeptideTGF-beta propeptideFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001839
all species →		DomainTransforming growth factor-beta, C-terminalInterproscan
IPR029034
all species →		Homologous_superfamilyCystine-knot cytokineInterproscan
IPR001111
all species →		DomainTGF-beta, propeptideInterproscan
IPR015615
all species →		FamilyTransforming growth factor-beta-relatedInterproscan
IPR017948
all species →		Conserved_siteTransforming growth factor beta, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11848
all species →		TGF-BETA FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008083
all species →		Molecular Functiongrowth factor activityInterproscan
GO:0005125
all species →		Molecular Functioncytokine activityInterproscan
GO:0005576
all species →		Cellular Componentextracellular regionInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan
GO:0007179
all species →		Biological Processtransforming growth factor beta receptor signaling pathwayInterproscan
GO:0042127
all species →		Biological Processregulation of cell population proliferationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K13376TGFB2; transforming growth factor beta-2-Glycosaminoglycan binding proteinsko00536deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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