Gene detail

Detailed information of ENSOFVP00000023737.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_027038235.1, corepressor interacting with RBPJ 1-like isoform X2 [Pocillopora damicornis]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZI03	Corepressor interacting with RBPJ 1 OS=Gallus gallus OX=9031 GN=CIR1 PE=2 SV=1
Q5U2T8	Corepressor interacting with RBPJ 1 OS=Rattus norvegicus OX=10116 GN=Cir1 PE=1 SV=1
Q86X95	Corepressor interacting with RBPJ 1 OS=Homo sapiens OX=9606 GN=CIR1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007268 (this species only)

Pfam domain

No Pfam domain signature was detected for ENSOFVP00000023737.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR036875 all species →	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR040014 all species →	Family	Corepressor interacting with RBPJ 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13151 all species →	CBF1 INTERACTING COREPRESSOR CIR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0003714 all species →	Molecular Function	transcription corepressor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0045892 all species →	Biological Process	negative regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06066	CIR; CBF1 interacting corepressor	-	Epstein-Barr virus infection	ko05169	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.